RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 MRPL3P09001 348 aaKnown RBP6.95□□□□□ -1.3
ABCF3-205ENST00000466416 ATF1P18846 271 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 ETV1P50549 477 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 TPPP2P59282 170 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 SSX1Q16384 188 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 ODF4Q2M2E3 257 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 AKIRIN2Q53H80 203 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 ACTBL2Q562R1 376 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 RSBN1Q5VWQ0 802 aaPredicted RBP6.95□□□□□ -1.3
ABCF3-205ENST00000466416 UTS2BQ765I0 119 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 ACBD7Q8N6N7 88 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 BORCS5Q969J3 196 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 SPSB1Q96BD6 273 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 MS4A10Q96PG2 267 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 DCUN1D5Q9BTE7 237 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 SLIRPQ9GZT3 109 aaKnown RBP6.95□□□□□ -1.3
ABCF3-205ENST00000466416 NDUFB11Q9NX14 153 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 GFOD1Q9NXC2 390 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 CCDC59Q9P031 241 aaKnown RBP6.95□□□□□ -1.3
ABCF3-205ENST00000466416 SLC23A1Q9UHI7 598 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 CLEC2DQ9UHP7 191 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 FBXO7Q9Y3I1 522 aa6.95□□□□□ -1.3
ABCF3-205ENST00000466416 TRAV24A0A0B4J272 114 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 TRDV1A0A1B0GX56 115 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 SDCBPO00560 298 aaPredicted RBP6.94□□□□□ -1.3
ABCF3-205ENST00000466416 HSPB6O14558 160 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 MYL12BO14950 172 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 LANCL1O43813 399 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 GPX5O75715 221 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 CD7P09564 240 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 GADD45AP24522 165 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 SYNJ2BPP57105 145 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 VBP1P61758 197 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 PRR20EP86478 221 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 PRR20CP86479 221 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 PRR20DP86480 221 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 PRR20BP86481 221 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 PRR20AP86496 221 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 EWSR1Q01844 656 aaKnown RBP eCLIP6.94□□□□□ -1.3
ABCF3-205ENST00000466416 MED22Q15528 200 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 STEAP3Q658P3 488 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 TMPRSS11AQ6ZMR5 421 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 PLEKHG7Q6ZR37 379 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 BCDIN3DQ7Z5W3 292 aaKnown RBP6.94□□□□□ -1.3
ABCF3-205ENST00000466416 LYG2Q86SG7 212 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 TMEM217Q8N7C4 229 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 NPBQ8NG41 125 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 PHLDA1Q8WV24 401 aaPredicted RBP6.94□□□□□ -1.3
ABCF3-205ENST00000466416 ARL11Q969Q4 196 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 CNN2Q99439 309 aaKnown RBP6.94□□□□□ -1.3
ABCF3-205ENST00000466416 DCSTAMPQ9H295 470 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 ERVK13-1Q9NX77 482 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 BABAM2Q9NXR7 383 aa6.94□□□□□ -1.3
ABCF3-205ENST00000466416 VPS13DQ5THJ4 4388 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 A0A0G2JLM5 398 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 C13orf42A0A1B0GVH6 325 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 CCDC182A6NF36 153 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 METTL15A6NJ78 407 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 ZNF785A8K8V0 405 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 ZNF670-ZNF695F2Z2N8 137 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 C15orf65H3BRN8 121 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 MAGEB4O15481 346 aaPredicted RBP6.93□□□□□ -1.3
ABCF3-205ENST00000466416 ORC5O43913 435 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 RPP14O95059 124 aaKnown RBP6.93□□□□□ -1.3
ABCF3-205ENST00000466416 TRGV3P03979 118 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 OR2T7P0C7T2 308 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 OCM2P0CE71 109 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 OCMP0CE72 109 aaPredicted RBP6.93□□□□□ -1.3
ABCF3-205ENST00000466416 BMI1P35226 326 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 ETV6P41212 452 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 NCS1P62166 190 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 CX3CL1P78423 397 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 NDPQ00604 133 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 ZNF846Q147U1 533 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 TRAM1Q15629 374 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 KCTD20Q7Z5Y7 419 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 PPP1R27Q86WC6 154 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 SYS1Q8N2H4 156 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 PLPPR1Q8TBJ4 325 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 RFT1Q96AA3 541 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 ADAT3Q96EY9 351 aaPredicted RBP6.93□□□□□ -1.3
ABCF3-205ENST00000466416 RITA1Q96K30 269 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 GGTLC1Q9BX51 225 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 WDR12Q9GZL7 423 aaKnown RBP6.93□□□□□ -1.3
ABCF3-205ENST00000466416 OR51E2Q9H255 320 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 NEK6Q9HC98 313 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 AKIP1Q9NQ31 210 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 PEMTQ9UBM1 199 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 SSR3Q9UNL2 185 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 DHDHQ9UQ10 334 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 TP53TG1Q9Y2A0 90 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 PEX16Q9Y5Y5 336 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 PKHD1P08F94 4074 aa6.93□□□□□ -1.3
ABCF3-205ENST00000466416 TRAV39A0A0B4J263 110 aa6.92□□□□□ -1.3
ABCF3-205ENST00000466416 OR2A4O95047 310 aa6.92□□□□□ -1.3
ABCF3-205ENST00000466416 NDUFA3O95167 84 aa6.92□□□□□ -1.3
ABCF3-205ENST00000466416 KRT8P05787 483 aa6.92□□□□□ -1.3
ABCF3-205ENST00000466416 HSMCR30P0CW71 290 aa6.92□□□□□ -1.3
ABCF3-205ENST00000466416 EGR2P11161 476 aaPredicted RBP6.92□□□□□ -1.3
ABCF3-205ENST00000466416 ATP6V1E1P36543 226 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms