RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 CLEC9AQ6UXN8 241 aa9.04□□□□□ -0.96
VCP-204ENST00000466100 OR51S1Q8NGJ8 323 aa9.04□□□□□ -0.96
VCP-204ENST00000466100 ST6GALNAC6Q969X2 333 aa9.04□□□□□ -0.96
VCP-204ENST00000466100 ZNF251Q9BRH9 671 aa9.04□□□□□ -0.96
VCP-204ENST00000466100 C7orf50Q9BRJ6 194 aaKnown RBP9.04□□□□□ -0.96
VCP-204ENST00000466100 PALMDQ9NP74 551 aa9.04□□□□□ -0.96
VCP-204ENST00000466100 YAE1D1Q9NRH1 226 aa9.04□□□□□ -0.96
VCP-204ENST00000466100 SETD2Q9BYW2 2564 aaPredicted RBP9.03□□□□□ -0.96
VCP-204ENST00000466100 IGHV3OR16-10A0A075B7F0 116 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 LINC00854A0A1B0GVQ3 168 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 A0A1W2PRD5 423 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 A0A1W2PRF3 423 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 A0A1W2PRM7 423 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 NAP1L6A6NFF2 107 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 DISC1C4P0D8 188 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 BUB1B-PAK6H3BSN5 160 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 NPFFO15130 113 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 LYRM1O43325 122 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 PROP1O75360 226 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 IFNA6P05013 189 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 ARG1P05089 322 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 OR8U9P0C7N5 309 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 SAA4P35542 130 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 INPP1P49441 399 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 RAB7AP51149 207 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 PRRX1P54821 245 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 TSPAN5P62079 268 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 MIDNQ504T8 468 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 C9orf139Q6ZV77 190 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 LHFPL4Q7Z7J7 247 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 TMEM17Q86X19 198 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 OR6F1Q8NGZ6 308 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 OR8U1Q8NH10 309 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 TERB2Q8NHR7 220 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 C17orf50Q8WW18 174 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 ABHD14BQ96IU4 210 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 PRRT1Q99946 306 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 OR2D2Q9H210 308 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 GSX1Q9H4S2 264 aaPredicted RBP9.03□□□□□ -0.96
VCP-204ENST00000466100 GAB2Q9UQC2 676 aa9.03□□□□□ -0.96
VCP-204ENST00000466100 TBL2Q9Y4P3 447 aaKnown RBP9.03□□□□□ -0.96
VCP-204ENST00000466100 SAA2-SAA4A0A096LPE2 208 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 TOR1AO14656 332 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 SAA2P0DJI9 122 aaPredicted RBP9.02□□□□□ -0.97
VCP-204ENST00000466100 LUMP51884 338 aaPredicted RBP9.02□□□□□ -0.97
VCP-204ENST00000466100 UCP3P55916 312 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 FXYD4P59646 89 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 BPIFB3P59826 476 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 HERV-K104P61576 105 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 EIF4EBP1Q13541 118 aaPredicted RBP9.02□□□□□ -0.97
VCP-204ENST00000466100 DIAPH2-AS1Q14236 149 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 MSMO1Q15800 293 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 MINOS1Q5TGZ0 78 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 C16orf87Q6PH81 154 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 BRD3OSQ6XYD6 125 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 IDO2Q6ZQW0 420 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 ZNF833PQ6ZTB9 187 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 IL17RELQ6ZVW7 336 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 DYNAPQ8N1N2 210 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 ZNF645Q8N7E2 425 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.02□□□□□ -0.97
VCP-204ENST00000466100 OR10X1Q8NGY0 326 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 NANPQ8TBE9 248 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 MCUBQ9NWR8 336 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 NUP50Q9UKX7 468 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 RNF150Q9ULK6 438 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 AMMECR1Q9Y4X0 333 aaPredicted RBP9.02□□□□□ -0.97
VCP-204ENST00000466100 SOX21Q9Y651 276 aaPredicted RBP9.02□□□□□ -0.97
VCP-204ENST00000466100 MINOS1-NBL1R4GNA1 71 aa9.02□□□□□ -0.97
VCP-204ENST00000466100 RAB29O14966 203 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 HTR1DP28221 377 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 SLC6A1P30531 599 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 GNRHRP30968 328 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 CCR6P51684 374 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 ZNF816Q0VGE8 651 aaPredicted RBP9.01□□□□□ -0.97
VCP-204ENST00000466100 DCTN2Q13561 401 aaKnown RBP9.01□□□□□ -0.97
VCP-204ENST00000466100 SCGB2B2Q4G0G5 96 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 PLA1AQ53H76 456 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 RPL39P5Q59GN2 51 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 TPTE2P1Q5T6R2 138 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 FAM71F2Q6NXP2 309 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 ZNF818PQ6ZRF7 136 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 LYG1Q8N1E2 194 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 DRAM1Q8N682 238 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 TEX29Q8N6K0 151 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 MARCH1Q8TCQ1 289 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 SECTM1Q8WVN6 248 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 TOMM40LQ969M1 308 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 RSRP1Q9BUV0 290 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 SLC5A7Q9GZV3 580 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 GHITMQ9H3K2 345 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 CCL28Q9NRJ3 127 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 SDHAF2Q9NX18 166 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 PIPOXQ9P0Z9 390 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 DPM3Q9P2X0 92 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 SCP2D1Q9UJQ7 156 aa9.01□□□□□ -0.97
VCP-204ENST00000466100 A0A0U1RQK1 487 aa9□□□□□ -0.97
VCP-204ENST00000466100 A0A1W2PPI3 338 aa9□□□□□ -0.97
VCP-204ENST00000466100 CENPXA8MT69 81 aa9□□□□□ -0.97
VCP-204ENST00000466100 LEUTXA8MZ59 168 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms