RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 FAM90A22PA8MWA6 464 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 TMEM14DPA8MWL7 114 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 C12orf77C9JDV5 145 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 BUB1B-PAK6H3BSN5 160 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 J3QR06 171 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 LDLRAD4O15165 306 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 SOCS1O15524 211 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 TSPAN9O75954 239 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 IL1AP01583 271 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 GTF2F2P13984 249 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 CALRP27797 417 aaKnown RBP3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 CHATP28329 748 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 TGFBR1P36897 503 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 TMEM50BP56557 158 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 RPS27AP62979 156 aaKnown RBP3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 PMS2P11Q13670 270 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 RBM39Q14498 530 aaKnown RBP3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 GNMTQ14749 295 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 MOGAT2Q3SYC2 334 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 TPTE2P1Q5T6R2 138 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 SYT6Q5T7P8 510 aaPredicted RBP3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 HES5Q5TA89 166 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 UBE2UQ5VVX9 321 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 DHRS7BQ6IAN0 325 aaPredicted RBP3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 RAB12Q6IQ22 244 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 CD200R1LQ6Q8B3 271 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 C10orf99Q6UWK7 81 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 GDPGP1Q6ZNW5 385 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 CDH26Q8IXH8 852 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 LYG1Q8N1E2 194 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 ZNF439Q8NDP4 499 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 OR51D1Q8NGF3 324 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 OR5R1Q8NH85 324 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 NDNFQ8TB73 568 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 MRPL30Q8TCC3 161 aaKnown RBP3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 PHYHIPQ92561 330 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 MALSU1Q96EH3 234 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 S100A13Q99584 98 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 UQCC2Q9BRT2 126 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 FAAP24Q9BTP7 215 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 BARHL1Q9BZE3 327 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 PARP12Q9H0J9 701 aaKnown RBP3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 LPAR5Q9H1C0 372 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 MMP28Q9H239 520 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 GAL3ST2Q9H3Q3 398 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 BEX1Q9HBH7 125 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 ISYNA1Q9NPH2 558 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 NDUFB11Q9NX14 153 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 ELF5Q9UKW6 265 aaPredicted RBP3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 TCF19Q9Y242 345 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 TBL2Q9Y4P3 447 aaKnown RBP3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 PEX16Q9Y5Y5 336 aa3.81□□□□□ -1.8
EXOSC3-204ENST00000465860 IGHV3-72A0A0B4J1Y9 119 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 TMEM272A0A1B0GTI8 110 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 A0A1W2PPI3 338 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 TMEM30CPA0ZSE6 113 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 FAM90A18PA6NE21 464 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 FAM90A16PA6NEW6 464 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 FAM90A20PA6NIJ5 464 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 FAM90A9PA6NNJ1 464 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 FAM90A12PA8MX19 464 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 FAM90A5PA8MXJ8 464 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 ZNF736B4DX44 427 aaPredicted RBP3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 AIPO00170 330 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 SLC17A2O00624 439 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 TIMM23O14925 209 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 ZNF780AO75290 641 aaPredicted RBP3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 PDCD6O75340 191 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 NDUFB8O95169 186 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 HBZP02008 142 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 CRYBA1P05813 215 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 FAM90A15PP0C7V4 464 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 FAM90A14PP0C7W9 464 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 SLC2A2P11168 524 aaPredicted RBP3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 FUT3P21217 361 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 MAPK3P27361 379 aaPredicted RBP3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 HTR1DP28221 377 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 GABRA5P31644 462 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 REG1BP48304 166 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 DYNLT3P51808 116 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 GABARAPL2P60520 117 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 RPL15P61313 204 aaKnown RBP3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 AANATQ16613 207 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 MPV17LQ2QL34 196 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 C2orf76Q3KRA6 126 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 CT45A1Q5HYN5 189 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 MINOS1Q5TGZ0 78 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 GLT8D1Q68CQ7 371 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 C22orf42Q6IC83 251 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 ZNF367Q7RTV3 350 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 LINC00596Q86U02 117 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 ODF3L1Q8IXM7 274 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 Q8N2B8 174 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 FAM89BQ8N5H3 189 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 NKAIN3Q8N8D7 197 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 ZNF565Q8N9K5 539 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 OR52L2PQ8NGH6 319 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 OR10V1Q8NGI7 309 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 OR4F5Q8NH21 305 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms