RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 Q96M66 194 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 ALX4Q9H161 411 aaPredicted RBP7.5□□□□□ -1.21
USP39-212ENST00000465514 MBNL3Q9NUK0 354 aaKnown RBP7.5□□□□□ -1.21
USP39-212ENST00000465514 CHCHD3Q9NX63 227 aaKnown RBP7.5□□□□□ -1.21
USP39-212ENST00000465514 SMPD3Q9NY59 655 aaPredicted RBP7.5□□□□□ -1.21
USP39-212ENST00000465514 JPT1Q9UK76 154 aa7.5□□□□□ -1.21
USP39-212ENST00000465514 PNMA8CA0A1B0GUJ8 204 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 YPEL1O60688 119 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 PDCD6O75340 191 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 SAP30O75446 220 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 RGS11O94810 467 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 BAG2O95816 211 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 CAPGP40121 348 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 SLURP1P55000 103 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 MED21Q13503 144 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 ZNF833PQ6ZTB9 187 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 ZNF554Q86TJ5 538 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 LYPD6Q86Y78 171 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 NPBQ8NG41 125 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 DLX4Q92988 240 aaPredicted RBP7.49□□□□□ -1.21
USP39-212ENST00000465514 FAM46BQ96A09 425 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 GALMQ96C23 342 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 DERL3Q96Q80 235 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 YPEL2Q96QA6 119 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 KIAA1456Q9P272 454 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 ERGIC3Q9Y282 383 aa7.49□□□□□ -1.21
USP39-212ENST00000465514 SAA2-SAA4A0A096LPE2 208 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 LINC01619G3V211 115 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 SOX15O60248 233 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 NDUFA3O95167 84 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 SAA2P0DJI9 122 aaPredicted RBP7.48□□□□□ -1.21
USP39-212ENST00000465514 NDPQ00604 133 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 GABPB1Q06547 395 aaPredicted RBP7.48□□□□□ -1.21
USP39-212ENST00000465514 ST3GAL4Q11206 333 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 ECSCRQ19T08 205 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 C19orf54Q5BKX5 351 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 LY6G6FQ5SQ64 297 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 C6orf141Q5SZD1 244 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 OR2AK2Q8NG84 335 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 CASTOR1Q8WTX7 329 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 CYGBQ8WWM9 190 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 GGHQ92820 318 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 SULT4A1Q9BR01 284 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 TOLLIPQ9H0E2 274 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 CST11Q9H112 138 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 RETNQ9HD89 108 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 C19orf73Q9NVV2 129 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 FBXO7Q9Y3I1 522 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 LRRC42Q9Y546 428 aa7.48□□□□□ -1.21
USP39-212ENST00000465514 A0A1W2PN81 502 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 FCN1O00602 326 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 RRHO14718 337 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 EGR2P11161 476 aaPredicted RBP7.47□□□□□ -1.21
USP39-212ENST00000465514 CELP19835 753 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 CHRNA7P36544 502 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 TAS2R43P59537 309 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 CX3CL1P78423 397 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 HMGN3Q15651 99 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 HAGHQ16775 308 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 LRRC36Q1X8D7 754 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 ZNF660Q6AZW8 331 aaPredicted RBP7.47□□□□□ -1.21
USP39-212ENST00000465514 FAM131AQ6UXB0 335 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 NKAIN3Q8N8D7 197 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 IL1F10Q8WWZ1 152 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 ARPC1AQ92747 370 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 NEDD4LQ96PU5 975 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 FAM110AQ9BQ89 295 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 UQCC2Q9BRT2 126 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 FAAP24Q9BTP7 215 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 IFI27L2Q9H2X8 130 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 GHITMQ9H3K2 345 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 FBXL15Q9H469 300 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 TPSG1Q9NRR2 321 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 ABRACLQ9P1F3 81 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 GHRLQ9UBU3 117 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 STEAP1Q9UHE8 339 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 FOXA2Q9Y261 457 aaPredicted RBP7.47□□□□□ -1.21
USP39-212ENST00000465514 NUBP2Q9Y5Y2 271 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 A3GALT2U3KPV4 340 aa7.47□□□□□ -1.21
USP39-212ENST00000465514 IGHV4OR15-8A0A075B7B6 117 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 A0A087WW49 117 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 EFCAB10A6NFE3 127 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 A8MZ25 164 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 RAB29O14966 203 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 DEDDO75618 318 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 IGHV3-11P01762 117 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 CD1AP06126 327 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 LGALS1P09382 135 aaKnown RBP7.46□□□□□ -1.22
USP39-212ENST00000465514 CT45A6P0DMU7 189 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 CT45A5P0DMU8 189 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 CT45A7P0DMV0 189 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 CRIP2P52943 208 aaPredicted RBP7.46□□□□□ -1.22
USP39-212ENST00000465514 TMEM267Q0VDI3 215 aaPredicted RBP7.46□□□□□ -1.22
USP39-212ENST00000465514 PLGLAQ15195 96 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 RPL39P5Q59GN2 51 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 TTC23Q5W5X9 447 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 OR10K2Q6IF99 312 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 FAM71F2Q6NXP2 309 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 ACSM6Q6P461 480 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 GLDNQ6ZMI3 551 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms