RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ATP6V0E1O15342 81 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 CNTFRP26992 372 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 MC5RP33032 325 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 LUMP51884 338 aaPredicted RBP11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 CRIP2P52943 208 aaPredicted RBP11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 TPBGQ13641 420 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 MED22Q15528 200 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 TRAM1Q15629 374 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 ZNF491Q8N8L2 437 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 MINDY2Q8NBR6 621 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 OR11H1Q8NG94 326 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 UFD1Q92890 307 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 URM1Q9BTM9 101 aaKnown RBP11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 LPAR5Q9H1C0 372 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 KLK15Q9H2R5 256 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 CHMP1AQ9HD42 196 aaPredicted RBP11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 ISYNA1Q9NPH2 558 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 SCOCQ9UIL1 159 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 HSF4Q9ULV5 492 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 TPRKBQ9Y3C4 175 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 WSB1Q9Y6I7 421 aa11.19□□□□□ -0.62
SNRNP40-203ENST00000463988 A0A0A6YYD4 124 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 OR5H14A6NHG9 310 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 G3V318 75 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 I3L521 148 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 SLC17A2O00624 439 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 ST8SIA5O15466 376 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 RBBP9O75884 186 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 OR8U8P0C7N1 319 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 NHLRC4P0CG21 123 aaPredicted RBP11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 CT45A6P0DMU7 189 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 CT45A5P0DMU8 189 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 CT45A7P0DMV0 189 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 PSMA1P25786 263 aaKnown RBP11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 RANBP1P43487 201 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 RAB9AP51151 201 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 INSL3P51460 131 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 LIPKQ5VXJ0 399 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 ZNF660Q6AZW8 331 aaPredicted RBP11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 FAM131AQ6UXB0 335 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 RNF5Q99942 180 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 AGMATQ9BSE5 352 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 DUSP21Q9H596 190 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 PARP11Q9NR21 331 aa11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 LSM4Q9Y4Z0 139 aaKnown RBP11.18□□□□□ -0.62
SNRNP40-203ENST00000463988 KMT2CQ8NEZ4 4911 aaKnown RBP11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 FOXI3A8MTJ6 420 aaPredicted RBP11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 ARL6IP5O75915 188 aa11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 ARSBP15848 533 aa11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 ZNF616Q08AN1 781 aa11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 C19orf54Q5BKX5 351 aa11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 TMEM91Q6ZNR0 172 aa11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 TCTEX1D1Q8N7M0 179 aa11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 OR5AN1Q8NGI8 311 aa11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 OR1N2Q8NGR9 330 aa11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 EDARADDQ8WWZ3 215 aa11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 TMEM203Q969S6 136 aa11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 PTX4Q96A99 478 aa11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 WWC2-AS2Q96NR7 200 aa11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 KCNK15Q9H427 330 aa11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 GNB4Q9HAV0 340 aa11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 AK3Q9UIJ7 227 aa11.17□□□□□ -0.62
SNRNP40-203ENST00000463988 SORL1Q92673 2214 aa11.16□□□□□ -0.62
SNRNP40-203ENST00000463988 H0YJW9 148 aa11.16□□□□□ -0.62
SNRNP40-203ENST00000463988 RRHO14718 337 aa11.16□□□□□ -0.62
SNRNP40-203ENST00000463988 SOCS1O15524 211 aa11.16□□□□□ -0.62
SNRNP40-203ENST00000463988 ZBTB25P24278 435 aa11.16□□□□□ -0.62
SNRNP40-203ENST00000463988 CEACAM6P40199 344 aa11.16□□□□□ -0.62
SNRNP40-203ENST00000463988 ECI1P42126 302 aa11.16□□□□□ -0.62
SNRNP40-203ENST00000463988 CX3CL1P78423 397 aa11.16□□□□□ -0.62
SNRNP40-203ENST00000463988 ZNF260Q3ZCT1 412 aa11.16□□□□□ -0.62
SNRNP40-203ENST00000463988 RPL39P5Q59GN2 51 aa11.16□□□□□ -0.62
SNRNP40-203ENST00000463988 SETD6Q8TBK2 473 aa11.16□□□□□ -0.62
SNRNP40-203ENST00000463988 GFI1Q99684 422 aa11.16□□□□□ -0.62
SNRNP40-203ENST00000463988 PLGRKTQ9HBL7 147 aa11.16□□□□□ -0.62
SNRNP40-203ENST00000463988 C12orf4Q9NQ89 552 aa11.16□□□□□ -0.62
SNRNP40-203ENST00000463988 NKX1-2Q9UD57 310 aaPredicted RBP11.16□□□□□ -0.62
SNRNP40-203ENST00000463988 WASHC3Q9Y3C0 194 aa11.16□□□□□ -0.62
SNRNP40-203ENST00000463988 HSPA12AO43301 675 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 RGS10O43665 173 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 GSTP1P09211 210 aaKnown RBP11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 CPEP16870 476 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 PSMD7P51665 324 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 AQP4P55087 323 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 TMEM50BP56557 158 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 HLA-DRB3P79483 266 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 NDPQ00604 133 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 TMEM267Q0VDI3 215 aaPredicted RBP11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 MLLT11Q13015 90 aaPredicted RBP11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 P2RY14Q15391 338 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 RAB11BQ15907 218 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 ASPHD1Q5U4P2 390 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 CD200R1LQ6Q8B3 271 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 ABHD14BQ96IU4 210 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 PRR25Q96S07 402 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 PARP12Q9H0J9 701 aaKnown RBP11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 C11orf54Q9H0W9 315 aaPredicted RBP11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 FBXL15Q9H469 300 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 Q9N2K0 584 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms