RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ST3GAL6Q9Y274 331 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 TRAV18A0A075B6X5 111 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 CLPSL1A2RUU4 121 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 OOEPA6NGQ2 149 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 OR2AT4A6NND4 320 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 LGALS8O00214 317 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 RGS5O15539 181 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 OR7C1O76099 320 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-204ENST00000463622 IGLV2-11P01706 119 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 CD3GP09693 182 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 HIST1H1DP16402 221 aaKnown RBP2.91□□□□□ -1.94
SCFD1-204ENST00000463622 OMGP23515 440 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 BLVRBP30043 206 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-204ENST00000463622 PRDX2P32119 198 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 GABRA2P47869 451 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 BTG1P62324 171 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 ZNF273Q14593 569 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 ZNF146Q15072 292 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 ZNF181Q2M3W8 571 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 PCGF3Q3KNV8 242 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 UBE2NLQ5JXB2 153 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 RSBN1Q5VWQ0 802 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-204ENST00000463622 FAAP20Q6NZ36 180 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 OR2W3Q7Z3T1 314 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 MKXQ8IYA7 352 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 MUC20Q8N307 709 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-204ENST00000463622 OR10R2Q8NGX6 335 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 OR10Z1Q8NGY1 313 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 OR4F5Q8NH21 305 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 ST8SIA4Q92187 359 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 THRSPQ92748 146 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 TRIM63Q969Q1 353 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 RAB39BQ96DA2 213 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 SRRQ9GZT4 340 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 PARP12Q9H0J9 701 aaKnown RBP2.91□□□□□ -1.94
SCFD1-204ENST00000463622 C1RLQ9NZP8 487 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 ZNF230Q9UIE0 474 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-204ENST00000463622 AK3Q9UIJ7 227 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 NPTNQ9Y639 398 aa2.91□□□□□ -1.94
SCFD1-204ENST00000463622 SAA2-SAA4A0A096LPE2 208 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 IGKV1-6A0A0C4DH72 117 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 ISPDA4D126 451 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 FAM25AB3EWG3 89 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 FAM25CB3EWG5 89 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 FAM25GB3EWG6 89 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 F5H0A9 414 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-204ENST00000463622 PDCD6O75340 191 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 MMP23AO75900 390 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 APOA1P02647 267 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 PPIAL4GP0DN37 164 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 GTF2F2P13984 249 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 ZNF44P15621 663 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 CD40LGP29965 261 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 SOX6P35712 828 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 GLIPR1P48060 266 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 PITPNBP48739 271 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 PAX8Q06710 450 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 AESQ08117 197 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 HERPUD1Q15011 391 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 NHLRC3Q5JS37 347 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 ATAD3CQ5T2N8 411 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 OR52W1Q6IF63 320 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 RAB12Q6IQ22 244 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 LRRC28Q86X40 367 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-204ENST00000463622 ZNF114Q8NC26 417 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 CHST4Q8NCG5 386 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 OR4D10Q8NGI6 311 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 OR13A1Q8NGR1 328 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 OR4K15Q8NH41 348 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 OR52I2Q8NH67 350 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 KCNG3Q8TAE7 436 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 MRPL30Q8TCC3 161 aaKnown RBP2.9□□□□□ -1.95
SCFD1-204ENST00000463622 CCDC107Q8WV48 283 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 ACOT12Q8WYK0 555 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 SNAPC3Q92966 411 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 CREB3L1Q96BA8 519 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 SDSLQ96GA7 329 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 DIRAS2Q96HU8 199 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 MMP26Q9NRE1 261 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 C19orf12Q9NSK7 152 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 ZNRD1Q9P1U0 126 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 KLK11Q9UBX7 282 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 RAB22AQ9UL26 194 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 MRPS7Q9Y2R9 242 aaKnown RBP2.9□□□□□ -1.95
SCFD1-204ENST00000463622 POLDIP2Q9Y2S7 368 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 NOP16Q9Y3C1 178 aaKnown RBP2.9□□□□□ -1.95
SCFD1-204ENST00000463622 PEX16Q9Y5Y5 336 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 ETV7Q9Y603 341 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 SOX21Q9Y651 276 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-204ENST00000463622 A3GALT2U3KPV4 340 aa2.9□□□□□ -1.95
SCFD1-204ENST00000463622 EPPK1P58107 5090 aaKnown RBP2.9□□□□□ -1.95
SCFD1-204ENST00000463622 FAM172BPA6NC97 362 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 CLDN25C9JDP6 229 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 NPIPB11E5RHQ5 1161 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 G3V4G9 280 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 DVL1O14640 695 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 DEGS1O15121 323 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 SIGLEC5O15389 551 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 ADAM20O43506 726 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 XRCC3O43542 346 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms