RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 C5orf64Q2M2E5 130 aa16.05■□□□□ 0.16
PDLIM4-205ENST00000463615 LCNL1Q6ZST4 164 aa16.05■□□□□ 0.16
PDLIM4-205ENST00000463615 IGHV7-81A0A0B4J1V7 117 aa16.04■□□□□ 0.16
PDLIM4-205ENST00000463615 SOCS1O15524 211 aa16.04■□□□□ 0.16
PDLIM4-205ENST00000463615 IGLV1-40P01703 118 aa16.04■□□□□ 0.16
PDLIM4-205ENST00000463615 SLC2A2P11168 524 aaPredicted RBP16.04■□□□□ 0.16
PDLIM4-205ENST00000463615 CRIP2P52943 208 aaPredicted RBP16.04■□□□□ 0.16
PDLIM4-205ENST00000463615 TMEM50BP56557 158 aa16.04■□□□□ 0.16
PDLIM4-205ENST00000463615 RUNX1Q01196 453 aa16.04■□□□□ 0.16
PDLIM4-205ENST00000463615 DCTN2Q13561 401 aaKnown RBP16.04■□□□□ 0.16
PDLIM4-205ENST00000463615 KIAA0141Q14154 515 aaPredicted RBP16.04■□□□□ 0.16
PDLIM4-205ENST00000463615 IL1F10Q8WWZ1 152 aa16.04■□□□□ 0.16
PDLIM4-205ENST00000463615 UBE2E2Q96LR5 201 aa16.04■□□□□ 0.16
PDLIM4-205ENST00000463615 MGLLQ99685 303 aa16.04■□□□□ 0.16
PDLIM4-205ENST00000463615 PLGRKTQ9HBL7 147 aa16.04■□□□□ 0.16
PDLIM4-205ENST00000463615 CHMP1AQ9HD42 196 aaPredicted RBP16.04■□□□□ 0.16
PDLIM4-205ENST00000463615 AK3Q9UIJ7 227 aa16.04■□□□□ 0.16
PDLIM4-205ENST00000463615 DNAH9Q9NYC9 4486 aa16.04■□□□□ 0.16
PDLIM4-205ENST00000463615 OR5H14A6NHG9 310 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 LDLRAD4O15165 306 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 ST8SIA5O15466 376 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 HSMCR30P0CW71 290 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 CT45A6P0DMU7 189 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 CT45A5P0DMU8 189 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 CT45A7P0DMV0 189 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 CNTFRP26992 372 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 MC5RP33032 325 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 PSMD7P51665 324 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 RAB11BQ15907 218 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 LIN54Q6MZP7 749 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 MINDY2Q8NBR6 621 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 OR5AN1Q8NGI8 311 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 OR5M8Q8NGP6 311 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 PTX4Q96A99 478 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 DUX3Q96PT4 197 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 RNF5Q99942 180 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 ACOT13Q9NPJ3 140 aa16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 AK6Q9Y3D8 172 aaKnown RBP16.03■□□□□ 0.16
PDLIM4-205ENST00000463615 ATP6V0E1O15342 81 aa16.02■□□□□ 0.16
PDLIM4-205ENST00000463615 RAMP3O60896 148 aa16.02■□□□□ 0.16
PDLIM4-205ENST00000463615 RBBP9O75884 186 aa16.02■□□□□ 0.16
PDLIM4-205ENST00000463615 HLA-DRB3P79483 266 aa16.02■□□□□ 0.16
PDLIM4-205ENST00000463615 FABP5Q01469 135 aa16.02■□□□□ 0.16
PDLIM4-205ENST00000463615 P2RY14Q15391 338 aa16.02■□□□□ 0.16
PDLIM4-205ENST00000463615 TBCEQ15813 527 aaPredicted RBP16.02■□□□□ 0.16
PDLIM4-205ENST00000463615 DEFB136Q30KP8 78 aa16.02■□□□□ 0.16
PDLIM4-205ENST00000463615 C19orf54Q5BKX5 351 aa16.02■□□□□ 0.16
PDLIM4-205ENST00000463615 EDARADDQ8WWZ3 215 aa16.02■□□□□ 0.16
PDLIM4-205ENST00000463615 VCX3BQ9H321 246 aa16.02■□□□□ 0.16
PDLIM4-205ENST00000463615 Q9N2K0 584 aa16.02■□□□□ 0.16
PDLIM4-205ENST00000463615 C12orf4Q9NQ89 552 aa16.02■□□□□ 0.16
PDLIM4-205ENST00000463615 KIAA1456Q9P272 454 aa16.02■□□□□ 0.16
PDLIM4-205ENST00000463615 H0YJW9 148 aa16.01■□□□□ 0.15
PDLIM4-205ENST00000463615 ZBTB25P24278 435 aa16.01■□□□□ 0.15
PDLIM4-205ENST00000463615 HSPA13P48723 471 aa16.01■□□□□ 0.15
PDLIM4-205ENST00000463615 DGCR2P98153 550 aa16.01■□□□□ 0.15
PDLIM4-205ENST00000463615 ZNF660Q6AZW8 331 aaPredicted RBP16.01■□□□□ 0.15
PDLIM4-205ENST00000463615 FAM131AQ6UXB0 335 aa16.01■□□□□ 0.15
PDLIM4-205ENST00000463615 ZNF491Q8N8L2 437 aa16.01■□□□□ 0.15
PDLIM4-205ENST00000463615 OR56B1Q8NGI3 324 aa16.01■□□□□ 0.15
PDLIM4-205ENST00000463615 FAM3DQ96BQ1 224 aa16.01■□□□□ 0.15
PDLIM4-205ENST00000463615 HDHD3Q9BSH5 251 aaPredicted RBP16.01■□□□□ 0.15
PDLIM4-205ENST00000463615 TOLLIPQ9H0E2 274 aa16.01■□□□□ 0.15
PDLIM4-205ENST00000463615 PARP12Q9H0J9 701 aaKnown RBP16.01■□□□□ 0.15
PDLIM4-205ENST00000463615 V9GY05 133 aa16.01■□□□□ 0.15
PDLIM4-205ENST00000463615 TRAV41A0A0B4J266 112 aa16■□□□□ 0.15
PDLIM4-205ENST00000463615 G3V318 75 aa16■□□□□ 0.15
PDLIM4-205ENST00000463615 I3L521 148 aa16■□□□□ 0.15
PDLIM4-205ENST00000463615 CALRP27797 417 aaKnown RBP16■□□□□ 0.15
PDLIM4-205ENST00000463615 C2orf76Q3KRA6 126 aa16■□□□□ 0.15
PDLIM4-205ENST00000463615 RPL39P5Q59GN2 51 aa16■□□□□ 0.15
PDLIM4-205ENST00000463615 DEFB121Q5J5C9 76 aa16■□□□□ 0.15
PDLIM4-205ENST00000463615 C9orf66Q5T8R8 295 aa16■□□□□ 0.15
PDLIM4-205ENST00000463615 SETD6Q8TBK2 473 aa16■□□□□ 0.15
PDLIM4-205ENST00000463615 ARHGAP5-AS1Q96IT6 56 aa16■□□□□ 0.15
PDLIM4-205ENST00000463615 B9D2Q9BPU9 175 aa16■□□□□ 0.15
PDLIM4-205ENST00000463615 PECRQ9BY49 303 aa16■□□□□ 0.15
PDLIM4-205ENST00000463615 CCDC90BQ9GZT6 254 aa16■□□□□ 0.15
PDLIM4-205ENST00000463615 C11orf54Q9H0W9 315 aaPredicted RBP16■□□□□ 0.15
PDLIM4-205ENST00000463615 KLK15Q9H2R5 256 aa16■□□□□ 0.15
PDLIM4-205ENST00000463615 TRAV1-2A0A0B4J238 106 aa15.99■□□□□ 0.15
PDLIM4-205ENST00000463615 RRHO14718 337 aa15.99■□□□□ 0.15
PDLIM4-205ENST00000463615 PROP1O75360 226 aa15.99■□□□□ 0.15
PDLIM4-205ENST00000463615 CEACAM6P40199 344 aa15.99■□□□□ 0.15
PDLIM4-205ENST00000463615 MAP2K4P45985 399 aa15.99■□□□□ 0.15
PDLIM4-205ENST00000463615 VEGFCP49767 419 aa15.99■□□□□ 0.15
PDLIM4-205ENST00000463615 PLAC9Q5JTB6 97 aa15.99■□□□□ 0.15
PDLIM4-205ENST00000463615 CD200R1LQ6Q8B3 271 aa15.99■□□□□ 0.15
PDLIM4-205ENST00000463615 TCTEX1D1Q8N7M0 179 aa15.99■□□□□ 0.15
PDLIM4-205ENST00000463615 ABHD14BQ96IU4 210 aa15.99■□□□□ 0.15
PDLIM4-205ENST00000463615 PARP11Q9NR21 331 aa15.99■□□□□ 0.15
PDLIM4-205ENST00000463615 OR1A1Q9P1Q5 309 aa15.99■□□□□ 0.15
PDLIM4-205ENST00000463615 VSIG4Q9Y279 399 aa15.99■□□□□ 0.15
PDLIM4-205ENST00000463615 WASHC3Q9Y3C0 194 aa15.99■□□□□ 0.15
PDLIM4-205ENST00000463615 WSB1Q9Y6I7 421 aa15.99■□□□□ 0.15
PDLIM4-205ENST00000463615 DIRAS3O95661 229 aa15.98■□□□□ 0.15
PDLIM4-205ENST00000463615 SCTP09683 121 aa15.98■□□□□ 0.15
PDLIM4-205ENST00000463615 RAB9AP51151 201 aa15.98■□□□□ 0.15
PDLIM4-205ENST00000463615 NDPQ00604 133 aa15.98■□□□□ 0.15
PDLIM4-205ENST00000463615 COL7A1Q02388 2944 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms