RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 RAB27BO00194 218 aa12.83□□□□□ -0.36
COL1A1-202ENST00000463440 WIPF1O43516 503 aa12.83□□□□□ -0.36
COL1A1-202ENST00000463440 PF4V1P10720 104 aa12.83□□□□□ -0.36
COL1A1-202ENST00000463440 SLC2A2P11168 524 aaPredicted RBP12.83□□□□□ -0.36
COL1A1-202ENST00000463440 GNB3P16520 340 aa12.83□□□□□ -0.36
COL1A1-202ENST00000463440 F2RL1P55085 397 aa12.83□□□□□ -0.36
COL1A1-202ENST00000463440 ARL6IP1Q15041 203 aa12.83□□□□□ -0.36
COL1A1-202ENST00000463440 MMDQ15546 238 aa12.83□□□□□ -0.36
COL1A1-202ENST00000463440 ZNF329Q86UD4 541 aa12.83□□□□□ -0.36
COL1A1-202ENST00000463440 STPG2Q8N412 459 aa12.83□□□□□ -0.36
COL1A1-202ENST00000463440 FAM71E2Q8N5Q1 922 aa12.83□□□□□ -0.36
COL1A1-202ENST00000463440 COMMD1Q8N668 190 aa12.83□□□□□ -0.36
COL1A1-202ENST00000463440 CHCHD6Q9BRQ6 235 aa12.83□□□□□ -0.36
COL1A1-202ENST00000463440 GON7Q9BXV9 100 aa12.83□□□□□ -0.36
COL1A1-202ENST00000463440 ATG5Q9H1Y0 275 aa12.83□□□□□ -0.36
COL1A1-202ENST00000463440 OR1A1Q9P1Q5 309 aa12.83□□□□□ -0.36
COL1A1-202ENST00000463440 KCNK7Q9Y2U2 307 aa12.83□□□□□ -0.36
COL1A1-202ENST00000463440 CMYA5Q8N3K9 4069 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 A0A075B6Q4 140 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 MFNGO00587 321 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 FCGR3AP08637 254 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 HIST1H1DP16402 221 aaKnown RBP12.82□□□□□ -0.36
COL1A1-202ENST00000463440 CD36P16671 472 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 SOX6P35712 828 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 SERPINB10P48595 397 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 ACTBP60709 375 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 ARFRP1Q13795 201 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 KIR2DS1Q14954 304 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 C1QL4Q86Z23 238 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 OR4A4PQ8NGN8 299 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 PHF21AQ96BD5 680 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 ZNF251Q9BRH9 671 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 PARP12Q9H0J9 701 aaKnown RBP12.82□□□□□ -0.36
COL1A1-202ENST00000463440 C11orf54Q9H0W9 315 aaPredicted RBP12.82□□□□□ -0.36
COL1A1-202ENST00000463440 DAPK2Q9UIK4 370 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 LINC00527Q9UJ94 153 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 NOTCH1P46531 2555 aa12.82□□□□□ -0.36
COL1A1-202ENST00000463440 LOC100506127A0A0U1RQW1 187 aa12.81□□□□□ -0.36
COL1A1-202ENST00000463440 LINC01548A6NM66 108 aa12.81□□□□□ -0.36
COL1A1-202ENST00000463440 FABP7O15540 132 aa12.81□□□□□ -0.36
COL1A1-202ENST00000463440 RRP9O43818 475 aaKnown RBP12.81□□□□□ -0.36
COL1A1-202ENST00000463440 SDC2P34741 201 aa12.81□□□□□ -0.36
COL1A1-202ENST00000463440 TALDO1P37837 337 aa12.81□□□□□ -0.36
COL1A1-202ENST00000463440 RPL39P5Q59GN2 51 aa12.81□□□□□ -0.36
COL1A1-202ENST00000463440 SFXN4Q6P4A7 337 aa12.81□□□□□ -0.36
COL1A1-202ENST00000463440 RBMXL1Q96E39 390 aaKnown RBP12.81□□□□□ -0.36
COL1A1-202ENST00000463440 ABHD14BQ96IU4 210 aa12.81□□□□□ -0.36
COL1A1-202ENST00000463440 AGMATQ9BSE5 352 aa12.81□□□□□ -0.36
COL1A1-202ENST00000463440 VCX3AQ9NNX9 186 aa12.81□□□□□ -0.36
COL1A1-202ENST00000463440 ZNF221Q9UK13 617 aa12.81□□□□□ -0.36
COL1A1-202ENST00000463440 PLXNB1O43157 2135 aa12.8□□□□□ -0.36
COL1A1-202ENST00000463440 IGKV1-6A0A0C4DH72 117 aa12.8□□□□□ -0.36
COL1A1-202ENST00000463440 OR5H14A6NHG9 310 aa12.8□□□□□ -0.36
COL1A1-202ENST00000463440 NBR2O15453 112 aa12.8□□□□□ -0.36
COL1A1-202ENST00000463440 SCGNO76038 276 aa12.8□□□□□ -0.36
COL1A1-202ENST00000463440 PF4P02776 101 aa12.8□□□□□ -0.36
COL1A1-202ENST00000463440 MC5RP33032 325 aa12.8□□□□□ -0.36
COL1A1-202ENST00000463440 MXD1Q05195 221 aa12.8□□□□□ -0.36
COL1A1-202ENST00000463440 FAM131AQ6UXB0 335 aa12.8□□□□□ -0.36
COL1A1-202ENST00000463440 CENPOQ9BU64 300 aa12.8□□□□□ -0.36
COL1A1-202ENST00000463440 RDH8Q9NYR8 311 aa12.8□□□□□ -0.36
COL1A1-202ENST00000463440 KIAA1456Q9P272 454 aa12.8□□□□□ -0.36
COL1A1-202ENST00000463440 ZNF107Q9UII5 783 aaPredicted RBP12.8□□□□□ -0.36
COL1A1-202ENST00000463440 A0A087WXM4 84 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 G3V4G9 280 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 BET1O15155 118 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 TNFAIP8O95379 198 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 DIRAS3O95661 229 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 CT45A6P0DMU7 189 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 CT45A5P0DMU8 189 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 CT45A7P0DMV0 189 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 CD33P20138 364 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 PNLIPRP3Q17RR3 467 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 TIMM50Q3ZCQ8 353 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 PDLIM3Q53GG5 364 aaPredicted RBP12.79□□□□□ -0.36
COL1A1-202ENST00000463440 SAMD5Q5TGI4 173 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 TEX38Q6PEX7 206 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 OR10J5Q8NHC4 309 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 HSPB9Q9BQS6 159 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 CABLES2Q9BTV7 478 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 TOLLIPQ9H0E2 274 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.79□□□□□ -0.36
COL1A1-202ENST00000463440 ZFP57Q9NU63 452 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 RNF150Q9ULK6 438 aa12.79□□□□□ -0.36
COL1A1-202ENST00000463440 H7C2Y5 167 aa12.78□□□□□ -0.36
COL1A1-202ENST00000463440 RBBP9O75884 186 aa12.78□□□□□ -0.36
COL1A1-202ENST00000463440 GSTT2P0CG29 244 aa12.78□□□□□ -0.36
COL1A1-202ENST00000463440 GSTT2BP0CG30 244 aa12.78□□□□□ -0.36
COL1A1-202ENST00000463440 SNRPBP14678 240 aaKnown RBP12.78□□□□□ -0.36
COL1A1-202ENST00000463440 VDAC1P21796 283 aa12.78□□□□□ -0.36
COL1A1-202ENST00000463440 SCAND1P57086 179 aa12.78□□□□□ -0.36
COL1A1-202ENST00000463440 RPL23AP62750 156 aaKnown RBP12.78□□□□□ -0.36
COL1A1-202ENST00000463440 SRSF7Q16629 238 aaKnown RBP eCLIP12.78□□□□□ -0.36
COL1A1-202ENST00000463440 CDNFQ49AH0 187 aa12.78□□□□□ -0.36
COL1A1-202ENST00000463440 IGSF11Q5DX21 431 aa12.78□□□□□ -0.36
COL1A1-202ENST00000463440 TSPAN14Q8NG11 270 aa12.78□□□□□ -0.36
COL1A1-202ENST00000463440 NPBQ8NG41 125 aa12.78□□□□□ -0.36
COL1A1-202ENST00000463440 LGALS14Q8TCE9 139 aa12.78□□□□□ -0.36
COL1A1-202ENST00000463440 MAFIPQ8WZ33 124 aa12.78□□□□□ -0.36
COL1A1-202ENST00000463440 RITA1Q96K30 269 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms