RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 ZNF343Q6P1L6 599 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 HEPN1Q6WQI6 88 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 ZNF645Q8N7E2 425 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 NANPQ8TBE9 248 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 S100A9P06702 114 aaKnown RBP14.24□□□□□ -0.13
ACTB-207ENST00000462494 GABRA2P47869 451 aa14.24□□□□□ -0.13
ACTB-207ENST00000462494 ZNF726P1Q15940 193 aa14.24□□□□□ -0.13
ACTB-207ENST00000462494 LRRC75BQ2VPJ9 315 aa14.24□□□□□ -0.13
ACTB-207ENST00000462494 PRAMEF6Q5VXH4 476 aa14.24□□□□□ -0.13
ACTB-207ENST00000462494 SSX7Q7RTT5 188 aa14.24□□□□□ -0.13
ACTB-207ENST00000462494 MRGPRDQ8TDS7 321 aa14.24□□□□□ -0.13
ACTB-207ENST00000462494 MALSU1Q96EH3 234 aa14.24□□□□□ -0.13
ACTB-207ENST00000462494 YPEL4Q96NS1 127 aa14.24□□□□□ -0.13
ACTB-207ENST00000462494 OR4C12Q96R67 309 aa14.24□□□□□ -0.13
ACTB-207ENST00000462494 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.23□□□□□ -0.13
ACTB-207ENST00000462494 UBE2L5PA0A1B0GUS4 154 aa14.23□□□□□ -0.13
ACTB-207ENST00000462494 HBZP02008 142 aa14.23□□□□□ -0.13
ACTB-207ENST00000462494 RPL30P62888 115 aaKnown RBP14.23□□□□□ -0.13
ACTB-207ENST00000462494 TRIP6Q15654 476 aaKnown RBP14.23□□□□□ -0.13
ACTB-207ENST00000462494 VWA1Q6PCB0 445 aa14.23□□□□□ -0.13
ACTB-207ENST00000462494 BTNL3Q6UXE8 466 aa14.23□□□□□ -0.13
ACTB-207ENST00000462494 FDCSPQ8NFU4 85 aa14.23□□□□□ -0.13
ACTB-207ENST00000462494 NINJ1Q92982 152 aa14.23□□□□□ -0.13
ACTB-207ENST00000462494 RBKSQ9H477 322 aa14.23□□□□□ -0.13
ACTB-207ENST00000462494 METTL1Q9UBP6 276 aaKnown RBP14.23□□□□□ -0.13
ACTB-207ENST00000462494 TRAV1-1A0A0B4J248 108 aa14.23□□□□□ -0.13
ACTB-207ENST00000462494 TIMM8AO60220 97 aaPredicted RBP14.23□□□□□ -0.13
ACTB-207ENST00000462494 FABP6P51161 128 aa14.23□□□□□ -0.13
ACTB-207ENST00000462494 SLC38A11Q08AI6 406 aa14.23□□□□□ -0.13
ACTB-207ENST00000462494 C11orf53Q8IXP5 236 aa14.23□□□□□ -0.13
ACTB-207ENST00000462494 TPRX1Q8N7U7 411 aa14.23□□□□□ -0.13
ACTB-207ENST00000462494 WDR61Q9GZS3 305 aaKnown RBP14.23□□□□□ -0.13
ACTB-207ENST00000462494 HES4Q9HCC6 221 aa14.23□□□□□ -0.13
ACTB-207ENST00000462494 MSL2Q9HCI7 577 aa14.23□□□□□ -0.13
ACTB-207ENST00000462494 ZFHX4Q86UP3 3567 aa14.23□□□□□ -0.13
ACTB-207ENST00000462494 CACNA1DQ01668 2161 aa14.23□□□□□ -0.13
ACTB-207ENST00000462494 OOEPA6NGQ2 149 aa14.22□□□□□ -0.13
ACTB-207ENST00000462494 S100A8P05109 93 aa14.22□□□□□ -0.13
ACTB-207ENST00000462494 TNFRSF9Q07011 255 aa14.22□□□□□ -0.13
ACTB-207ENST00000462494 PRR14LQ5THK1 2151 aa14.22□□□□□ -0.13
ACTB-207ENST00000462494 Q6ZR03 302 aa14.22□□□□□ -0.13
ACTB-207ENST00000462494 C5orf30Q96GV9 206 aa14.22□□□□□ -0.13
ACTB-207ENST00000462494 RCC1LQ96I51 464 aaKnown RBP14.22□□□□□ -0.13
ACTB-207ENST00000462494 PSMG3Q9BT73 122 aaPredicted RBP14.22□□□□□ -0.13
ACTB-207ENST00000462494 HIPK2Q9H2X6 1198 aa14.22□□□□□ -0.13
ACTB-207ENST00000462494 DSPP15924 2871 aaKnown RBP14.22□□□□□ -0.13
ACTB-207ENST00000462494 AP4M1O00189 453 aa14.22□□□□□ -0.13
ACTB-207ENST00000462494 IGHV2-5P01817 119 aa14.22□□□□□ -0.13
ACTB-207ENST00000462494 OR8U8P0C7N1 319 aa14.22□□□□□ -0.13
ACTB-207ENST00000462494 BCL2P10415 239 aa14.22□□□□□ -0.13
ACTB-207ENST00000462494 MAS1LP35410 378 aa14.22□□□□□ -0.13
ACTB-207ENST00000462494 Q8WTZ3 238 aa14.22□□□□□ -0.13
ACTB-207ENST00000462494 TCTEX1D2Q8WW35 142 aa14.22□□□□□ -0.13
ACTB-207ENST00000462494 CXXC4Q9H2H0 198 aa14.22□□□□□ -0.13
ACTB-207ENST00000462494 A0A087WWC5 75 aa14.21□□□□□ -0.13
ACTB-207ENST00000462494 IGHV3-43A0A0B4J1X8 118 aa14.21□□□□□ -0.13
ACTB-207ENST00000462494 S1PR2O95136 353 aa14.21□□□□□ -0.13
ACTB-207ENST00000462494 IGHV3-43DP0DP04 118 aa14.21□□□□□ -0.13
ACTB-207ENST00000462494 ELOBQ15370 118 aa14.21□□□□□ -0.13
ACTB-207ENST00000462494 ZNF674Q2M3X9 581 aa14.21□□□□□ -0.13
ACTB-207ENST00000462494 ACP7Q6ZNF0 438 aa14.21□□□□□ -0.13
ACTB-207ENST00000462494 SLC35E3Q7Z769 313 aa14.21□□□□□ -0.13
ACTB-207ENST00000462494 C9orf106Q8NAJ2 232 aa14.21□□□□□ -0.13
ACTB-207ENST00000462494 COQ2Q96H96 371 aa14.21□□□□□ -0.13
ACTB-207ENST00000462494 CISD1Q9NZ45 108 aaKnown RBP14.21□□□□□ -0.13
ACTB-207ENST00000462494 CLN8Q9UBY8 286 aa14.21□□□□□ -0.13
ACTB-207ENST00000462494 METRNQ9UJH8 293 aa14.21□□□□□ -0.13
ACTB-207ENST00000462494 PTBP3O95758 552 aaKnown RBP14.21□□□□□ -0.14
ACTB-207ENST00000462494 IGHG3P01860 377 aa14.21□□□□□ -0.14
ACTB-207ENST00000462494 CD55P08174 381 aa14.21□□□□□ -0.14
ACTB-207ENST00000462494 CXCL1P09341 107 aa14.21□□□□□ -0.14
ACTB-207ENST00000462494 SSTR5P35346 364 aa14.21□□□□□ -0.14
ACTB-207ENST00000462494 KIR2DL2P43627 348 aaPredicted RBP14.21□□□□□ -0.14
ACTB-207ENST00000462494 RPS16P62249 146 aaKnown RBP14.21□□□□□ -0.14
ACTB-207ENST00000462494 SERF2P84101 59 aa14.21□□□□□ -0.14
ACTB-207ENST00000462494 MSMO1Q15800 293 aa14.21□□□□□ -0.14
ACTB-207ENST00000462494 TMEM41BQ5BJD5 291 aa14.21□□□□□ -0.14
ACTB-207ENST00000462494 SLC35E4Q6ICL7 350 aa14.21□□□□□ -0.14
ACTB-207ENST00000462494 WDR31Q8NA23 367 aa14.21□□□□□ -0.14
ACTB-207ENST00000462494 RFESDQ8TAC1 157 aa14.21□□□□□ -0.14
ACTB-207ENST00000462494 TAF15Q92804 592 aaKnown RBP eCLIP14.21□□□□□ -0.14
ACTB-207ENST00000462494 CFAP47Q6ZTR5 3102 aa14.2□□□□□ -0.14
ACTB-207ENST00000462494 C17orf98A8MV24 154 aa14.2□□□□□ -0.14
ACTB-207ENST00000462494 DEFB108AA8MXU0 73 aa14.2□□□□□ -0.14
ACTB-207ENST00000462494 FAM90A26D6RGX4 464 aa14.2□□□□□ -0.14
ACTB-207ENST00000462494 RBMXL2O75526 392 aaKnown RBP14.2□□□□□ -0.14
ACTB-207ENST00000462494 IGKV3-15P01624 115 aa14.2□□□□□ -0.14
ACTB-207ENST00000462494 SMIM6P0DI80 62 aa14.2□□□□□ -0.14
ACTB-207ENST00000462494 PLA2G5P39877 138 aa14.2□□□□□ -0.14
ACTB-207ENST00000462494 GLIPR1P48060 266 aa14.2□□□□□ -0.14
ACTB-207ENST00000462494 ERVFRD-1P60508 538 aa14.2□□□□□ -0.14
ACTB-207ENST00000462494 COL10A1Q03692 680 aa14.2□□□□□ -0.14
ACTB-207ENST00000462494 KIAA0141Q14154 515 aaPredicted RBP14.2□□□□□ -0.14
ACTB-207ENST00000462494 NCMAPQ5T1S8 102 aa14.2□□□□□ -0.14
ACTB-207ENST00000462494 WDR82Q6UXN9 313 aa14.2□□□□□ -0.14
ACTB-207ENST00000462494 C1QL4Q86Z23 238 aa14.2□□□□□ -0.14
ACTB-207ENST00000462494 ZBTB34Q8NCN2 500 aa14.2□□□□□ -0.14
ACTB-207ENST00000462494 MBD3L1Q8WWY6 194 aa14.2□□□□□ -0.14
ACTB-207ENST00000462494 CHD3Q12873 2000 aaKnown RBP14.2□□□□□ -0.14
ACTB-207ENST00000462494 TGIF2-C20orf24A0A0A6YYL0 155 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms