RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 ST8SIA5O15466 376 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 RBBP9O75884 186 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 LGALS1P09382 135 aaKnown RBP11.93□□□□□ -0.5
SKA3-204ENST00000462482 OR8U9P0C7N5 309 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 CX3CL1P78423 397 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 PITPNAQ00169 270 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 ASPHD1Q5U4P2 390 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 AHSA2Q719I0 299 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 MOB1BQ7L9L4 216 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 MS4A15Q8N5U1 240 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 MUC7Q8TAX7 377 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 DLX4Q92988 240 aaPredicted RBP11.93□□□□□ -0.5
SKA3-204ENST00000462482 RCHY1Q96PM5 261 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 SULT4A1Q9BR01 284 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 FAAP24Q9BTP7 215 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 TOLLIPQ9H0E2 274 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 RIMS4Q9H426 269 aaPredicted RBP11.93□□□□□ -0.5
SKA3-204ENST00000462482 FBXL15Q9H469 300 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 PALMDQ9NP74 551 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 SLC23A1Q9UHI7 598 aa11.93□□□□□ -0.5
SKA3-204ENST00000462482 EBAG9O00559 213 aa11.92□□□□□ -0.5
SKA3-204ENST00000462482 HSPA12AO43301 675 aa11.92□□□□□ -0.5
SKA3-204ENST00000462482 SLURP1P55000 103 aa11.92□□□□□ -0.5
SKA3-204ENST00000462482 RPS27AP62979 156 aaKnown RBP11.92□□□□□ -0.5
SKA3-204ENST00000462482 ACSM3Q53FZ2 586 aa11.92□□□□□ -0.5
SKA3-204ENST00000462482 ACTBL2Q562R1 376 aa11.92□□□□□ -0.5
SKA3-204ENST00000462482 RBM48Q5RL73 367 aaKnown RBP11.92□□□□□ -0.5
SKA3-204ENST00000462482 C6orf141Q5SZD1 244 aa11.92□□□□□ -0.5
SKA3-204ENST00000462482 C6orf201Q7Z4U5 140 aa11.92□□□□□ -0.5
SKA3-204ENST00000462482 PPP1R27Q86WC6 154 aa11.92□□□□□ -0.5
SKA3-204ENST00000462482 LYPD6Q86Y78 171 aa11.92□□□□□ -0.5
SKA3-204ENST00000462482 EDARADDQ8WWZ3 215 aa11.92□□□□□ -0.5
SKA3-204ENST00000462482 RNF5Q99942 180 aa11.92□□□□□ -0.5
SKA3-204ENST00000462482 ELOVL1Q9BW60 279 aa11.92□□□□□ -0.5
SKA3-204ENST00000462482 ALX4Q9H161 411 aaPredicted RBP11.92□□□□□ -0.5
SKA3-204ENST00000462482 IFI27L2Q9H2X8 130 aa11.92□□□□□ -0.5
SKA3-204ENST00000462482 PLEKHJ1Q9NW61 149 aa11.92□□□□□ -0.5
SKA3-204ENST00000462482 MGAT4AQ9UM21 535 aa11.92□□□□□ -0.5
SKA3-204ENST00000462482 WASHC3Q9Y3C0 194 aa11.92□□□□□ -0.5
SKA3-204ENST00000462482 HSPB1P04792 205 aaKnown RBP11.91□□□□□ -0.5
SKA3-204ENST00000462482 GP9P14770 177 aa11.91□□□□□ -0.5
SKA3-204ENST00000462482 SPNP16150 400 aa11.91□□□□□ -0.5
SKA3-204ENST00000462482 CRIP2P52943 208 aaPredicted RBP11.91□□□□□ -0.5
SKA3-204ENST00000462482 OR10K2Q6IF99 312 aa11.91□□□□□ -0.5
SKA3-204ENST00000462482 UNQ5815/PRO19632Q6UWF5 114 aa11.91□□□□□ -0.5
SKA3-204ENST00000462482 OVCH2Q7RTZ1 564 aa11.91□□□□□ -0.5
SKA3-204ENST00000462482 C5orf24Q7Z6I8 188 aa11.91□□□□□ -0.5
SKA3-204ENST00000462482 SBSPONQ8IVN8 264 aa11.91□□□□□ -0.5
SKA3-204ENST00000462482 SVOPQ8N4V2 548 aa11.91□□□□□ -0.5
SKA3-204ENST00000462482 BPIFB6Q8NFQ5 453 aa11.91□□□□□ -0.5
SKA3-204ENST00000462482 PHYHIPQ92561 330 aa11.91□□□□□ -0.5
SKA3-204ENST00000462482 ARPC1AQ92747 370 aa11.91□□□□□ -0.5
SKA3-204ENST00000462482 SLA2Q9H6Q3 261 aa11.91□□□□□ -0.5
SKA3-204ENST00000462482 PSORS1C1Q9UIG5 152 aa11.91□□□□□ -0.5
SKA3-204ENST00000462482 IGHV4OR15-8A0A075B7B6 117 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 A0A087WW49 117 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 CT45A6P0DMU7 189 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 CT45A5P0DMU8 189 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 CT45A7P0DMV0 189 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 CPEP16870 476 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 ZBTB25P24278 435 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 HTR2CP28335 458 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 TPPP2P59282 170 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 NDPQ00604 133 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 AKIRIN2Q53H80 203 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 RPL39P5Q59GN2 51 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 ACSM6Q6P461 480 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 CD200R1LQ6Q8B3 271 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 GLDNQ6ZMI3 551 aaPredicted RBP11.9□□□□□ -0.5
SKA3-204ENST00000462482 NANOGP1Q8N7R0 232 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 CASTOR1Q8WTX7 329 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 MS4A10Q96PG2 267 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 CLCC1Q96S66 551 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 TSNAXQ99598 290 aaKnown RBP11.9□□□□□ -0.5
SKA3-204ENST00000462482 URM1Q9BTM9 101 aaKnown RBP11.9□□□□□ -0.5
SKA3-204ENST00000462482 PLCXD1Q9NUJ7 323 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 METTL1Q9UBP6 276 aaKnown RBP11.9□□□□□ -0.5
SKA3-204ENST00000462482 ZNF221Q9UK13 617 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 NUBP2Q9Y5Y2 271 aa11.9□□□□□ -0.5
SKA3-204ENST00000462482 H0YJW9 148 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 ITGB1BP1O14713 200 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 SLC22A1O15245 554 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 SOX15O60248 233 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 BPNT1O95861 308 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 IGHV3-11P01762 117 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 TFAP2AP05549 437 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 FRMD6-AS1P0C7T7 363 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 LYL1P12980 280 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 CEACAM6P40199 344 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 RPS16P62249 146 aaKnown RBP11.89□□□□□ -0.51
SKA3-204ENST00000462482 HSD17B12Q53GQ0 312 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 C1orf100Q5SVJ3 147 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 ABHD14BQ96IU4 210 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 TMED9Q9BVK6 235 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 MND1Q9BWT6 205 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 TM2D1Q9BX74 207 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 ZNF355PQ9NSJ1 428 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 FBXO7Q9Y3I1 522 aa11.89□□□□□ -0.51
SKA3-204ENST00000462482 FCN1O00602 326 aa11.88□□□□□ -0.51
SKA3-204ENST00000462482 NAPSAO96009 420 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms