RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CHATP28329 748 aa7□□□□□ -1.29
LDB1-203ENST00000461873 TALDO1P37837 337 aa7□□□□□ -1.29
LDB1-203ENST00000461873 CEACAM6P40199 344 aa7□□□□□ -1.29
LDB1-203ENST00000461873 ZNF134P52741 427 aa7□□□□□ -1.29
LDB1-203ENST00000461873 ZNF137PP52743 207 aa7□□□□□ -1.29
LDB1-203ENST00000461873 ACTBP60709 375 aa7□□□□□ -1.29
LDB1-203ENST00000461873 VBP1P61758 197 aa7□□□□□ -1.29
LDB1-203ENST00000461873 NCS1P62166 190 aa7□□□□□ -1.29
LDB1-203ENST00000461873 CD69Q07108 199 aa7□□□□□ -1.29
LDB1-203ENST00000461873 LSAMPQ13449 338 aa7□□□□□ -1.29
LDB1-203ENST00000461873 TPBGQ13641 420 aa7□□□□□ -1.29
LDB1-203ENST00000461873 P2RY14Q15391 338 aa7□□□□□ -1.29
LDB1-203ENST00000461873 C1orf100Q5SVJ3 147 aa7□□□□□ -1.29
LDB1-203ENST00000461873 FAM27D1Q5T7N8 215 aa7□□□□□ -1.29
LDB1-203ENST00000461873 OR10K2Q6IF99 312 aa7□□□□□ -1.29
LDB1-203ENST00000461873 LIN54Q6MZP7 749 aa7□□□□□ -1.29
LDB1-203ENST00000461873 FAM71F2Q6NXP2 309 aa7□□□□□ -1.29
LDB1-203ENST00000461873 MRPL41Q8IXM3 137 aaKnown RBP7□□□□□ -1.29
LDB1-203ENST00000461873 OR56B1Q8NGI3 324 aa7□□□□□ -1.29
LDB1-203ENST00000461873 CMSS1Q9BQ75 279 aaKnown RBP7□□□□□ -1.29
LDB1-203ENST00000461873 SULT4A1Q9BR01 284 aa7□□□□□ -1.29
LDB1-203ENST00000461873 CENPOQ9BU64 300 aa7□□□□□ -1.29
LDB1-203ENST00000461873 ISYNA1Q9NPH2 558 aa7□□□□□ -1.29
LDB1-203ENST00000461873 PARP11Q9NR21 331 aa7□□□□□ -1.29
LDB1-203ENST00000461873 SLC23A1Q9UHI7 598 aa7□□□□□ -1.29
LDB1-203ENST00000461873 AK6Q9Y3D8 172 aaKnown RBP7□□□□□ -1.29
LDB1-203ENST00000461873 NOTCH1P46531 2555 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 SMIM30A4D0T7 59 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 METTL21EPA6NDL7 271 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 OR5H14A6NHG9 310 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 ZNF736B4DX44 427 aaPredicted RBP6.99□□□□□ -1.29
LDB1-203ENST00000461873 SLC22A1O15245 554 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 AIREO43918 545 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 RAMP3O60896 148 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 APOA2P02652 100 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 RPLP1P05386 114 aaKnown RBP6.99□□□□□ -1.29
LDB1-203ENST00000461873 CD3GP09693 182 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 UCHL1P09936 223 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 HOXD3P31249 432 aaPredicted RBP6.99□□□□□ -1.29
LDB1-203ENST00000461873 CDX1P47902 265 aaPredicted RBP6.99□□□□□ -1.29
LDB1-203ENST00000461873 VEGFCP49767 419 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 F2RL1P55085 397 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 DGCR2P98153 550 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 FABP5Q01469 135 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 LY6G6FQ5SQ64 297 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 C9orf66Q5T8R8 295 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 Q6ZPA2 131 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 LRRTM1Q86UE6 522 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 ANKRD13BQ86YJ7 626 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 GAPTQ8N292 157 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 LINC00482Q8N8I6 264 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 ZNF439Q8NDP4 499 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 ST6GALNAC6Q969X2 333 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 ISOC1Q96CN7 298 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 DGCR14Q96DF8 476 aaKnown RBP6.99□□□□□ -1.29
LDB1-203ENST00000461873 KCTD7Q96MP8 289 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 TM2D1Q9BX74 207 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 C12orf4Q9NQ89 552 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 V9GY05 133 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 NOTCH3Q9UM47 2321 aa6.99□□□□□ -1.29
LDB1-203ENST00000461873 SAA2-SAA4A0A096LPE2 208 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 TRAV41A0A0B4J266 112 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 SMIM31A0A1B0GVY4 71 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 H3BMQ9 156 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 SLC17A2O00624 439 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 ST8SIA5O15466 376 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 RBBP9O75884 186 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 LY86O95711 162 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 IGF1P05019 195 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 CLEC2LP0C7M8 214 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 SAA2P0DJI9 122 aaPredicted RBP6.98□□□□□ -1.29
LDB1-203ENST00000461873 SERPINB10P48595 397 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 HLA-DRB3P79483 266 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 GNMTQ14749 295 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 KIR2DS1Q14954 304 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 SPCS2Q15005 226 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 ARL6IP1Q15041 203 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 HMGN3Q15651 99 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 CTF1Q16619 201 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 ECSCRQ19T08 205 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 CNPY1Q3B7I2 92 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 SIGIRRQ6IA17 410 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 C22orf42Q6IC83 251 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 FAM53AQ6NSI3 398 aaPredicted RBP6.98□□□□□ -1.29
LDB1-203ENST00000461873 TMEM91Q6ZNR0 172 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 ZNF833PQ6ZTB9 187 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 Q8N6K4 173 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 TCTEX1D1Q8N7M0 179 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 NABP2Q9BQ15 211 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 NICN1Q9BSH3 213 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 MRPL20Q9BYC9 149 aaKnown RBP6.98□□□□□ -1.29
LDB1-203ENST00000461873 OR51J1Q9H342 316 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.98□□□□□ -1.29
LDB1-203ENST00000461873 NDUFA13Q9P0J0 144 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 RSL24D1Q9UHA3 163 aaKnown RBP6.98□□□□□ -1.29
LDB1-203ENST00000461873 AK3Q9UIJ7 227 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 RAB22AQ9UL26 194 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 SSR3Q9UNL2 185 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 VSIG4Q9Y279 399 aa6.98□□□□□ -1.29
LDB1-203ENST00000461873 WASHC3Q9Y3C0 194 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms