RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 E5RGE8 158 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 SIGLEC5O15389 551 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 SSSCA1O60232 199 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 DEDDO75618 318 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 ATG12O94817 140 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 CDS2O95674 445 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 CLDN1O95832 211 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 CFDP00746 253 aaPredicted RBP5.65□□□□□ -1.5
MSH2-204ENST00000461394 MBPP02686 304 aaPredicted RBP5.65□□□□□ -1.5
MSH2-204ENST00000461394 OMGP23515 440 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 UCP1P25874 307 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 RPL12P30050 165 aaKnown RBP5.65□□□□□ -1.5
MSH2-204ENST00000461394 LPAR6P43657 344 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 NKX2-1P43699 371 aaPredicted RBP5.65□□□□□ -1.5
MSH2-204ENST00000461394 GNG10P50151 68 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 HTD2P86397 168 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 ZNF816Q0VGE8 651 aaPredicted RBP5.65□□□□□ -1.5
MSH2-204ENST00000461394 ESCO2Q56NI9 601 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 FAM53AQ6NSI3 398 aaPredicted RBP5.65□□□□□ -1.5
MSH2-204ENST00000461394 ZNF788Q6ZQV5 615 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 LDLRAD3Q86YD5 345 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 OR52M1Q8NGK5 317 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 PCNPQ8WW12 178 aaKnown RBP5.65□□□□□ -1.5
MSH2-204ENST00000461394 ST8SIA2Q92186 375 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 IL22RA2Q969J5 263 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 ABHD14BQ96IU4 210 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 TMEM56Q96MV1 263 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 MDFIQ99750 246 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 RNF126Q9BV68 326 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 RAB1BQ9H0U4 201 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 HEXA-AS1Q9H8Q6 139 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 IDI2-AS1Q9NZ38 188 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 JPT1Q9UK76 154 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 NSG2Q9Y328 171 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 TMEM56-RWDD3S4R434 201 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 CELSR3Q9NYQ7 3312 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 YLPM1P49750 1951 aaKnown RBP5.64□□□□□ -1.51
MSH2-204ENST00000461394 DSCAMO60469 2012 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 RNF222A6NCQ9 220 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 ZNF729A6NN14 1252 aaPredicted RBP5.64□□□□□ -1.51
MSH2-204ENST00000461394 H0YIZ8 118 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 C15orf65H3BRN8 121 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 M0R1X1 148 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 GPR137BO60478 399 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 RBMXL2O75526 392 aaKnown RBP5.64□□□□□ -1.51
MSH2-204ENST00000461394 TPT1P13693 172 aaKnown RBP5.64□□□□□ -1.51
MSH2-204ENST00000461394 VDAC1P21796 283 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 S100A1P23297 94 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 PPOXP50336 477 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 RAB7AP51149 207 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 EIF5AP63241 154 aaKnown RBP5.64□□□□□ -1.51
MSH2-204ENST00000461394 MST1LQ2TV78 715 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 MORN2Q502X0 79 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 PRAMEF5Q5TYX0 476 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 CLRN3Q8NCR9 226 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 SCARB1Q8WTV0 552 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 LEAP2Q969E1 77 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 RAB39BQ96DA2 213 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 FANCD2OSQ96PS1 177 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 HSD17B10Q99714 261 aaKnown RBP5.64□□□□□ -1.51
MSH2-204ENST00000461394 ABHD14AQ9BUJ0 271 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 SMIM3Q9BZL3 60 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 MAGT1Q9H0U3 335 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 GAL3ST2Q9H3Q3 398 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 UBTD1Q9HAC8 227 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 PLEKHA2Q9HB19 425 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 POMT1Q9Y6A1 747 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 CACNA1DQ01668 2161 aa5.64□□□□□ -1.51
MSH2-204ENST00000461394 ANKRD11Q6UB99 2663 aaPredicted RBP5.63□□□□□ -1.51
MSH2-204ENST00000461394 BORCS7-ASMTA0A0B4J1R7 106 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 KBTBD11-OT1A0A1B0GTJ5 212 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 A0A1W2PPE3 182 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 MSGN1A6NI15 193 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 LYNX1G3V0Z9 82 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 F2RL2O00254 374 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 DVL1O14640 695 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 TAAR5O14804 337 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 NDUFA2O43678 99 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 YPEL1O60688 119 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 LYNX1P0DP58 116 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 HKR1P10072 659 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 LYL1P12980 280 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 CAV2P51636 162 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 ERVK-16P61578 105 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 POLR2GP62487 172 aaKnown RBP eCLIP5.63□□□□□ -1.51
MSH2-204ENST00000461394 RPL31P62899 125 aaKnown RBP5.63□□□□□ -1.51
MSH2-204ENST00000461394 PAX5Q02548 391 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 MSMO1Q15800 293 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 C17orf58Q2M2W7 97 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 TMEM177Q53S58 311 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 AVPI1Q5T686 147 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 LYPD2Q6UXB3 125 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 ZNF66Q6ZN08 573 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 SPAG16Q8N0X2 631 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 LYG1Q8N1E2 194 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 FGFRL1Q8N441 504 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 OR4D5Q8NGN0 318 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 ITLN2Q8WWU7 325 aaPredicted RBP5.63□□□□□ -1.51
MSH2-204ENST00000461394 GPR146Q96CH1 333 aa5.63□□□□□ -1.51
MSH2-204ENST00000461394 TIMD4Q96H15 378 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms