RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 ANAPC10Q9UM13 185 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 SOX21Q9Y651 276 aaPredicted RBP8.6□□□□□ -1.03
UBR4-208ENST00000459947 KIAA2026Q5HYC2 2103 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 THBS3P49746 956 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 LUMP51884 338 aaPredicted RBP8.6□□□□□ -1.03
UBR4-208ENST00000459947 LY6EQ16553 131 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 AWAT1Q58HT5 328 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 Q8N2B8 174 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 C3orf56Q8N813 242 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 C11orf54Q9H0W9 315 aaPredicted RBP8.6□□□□□ -1.03
UBR4-208ENST00000459947 SCTP09683 121 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 HES1Q14469 280 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 DYNAPQ8N1N2 210 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 DRAM1Q8N682 238 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 DYNC2LI1Q8TCX1 351 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 NUDCD2Q8WVJ2 157 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 CFHR4Q92496 578 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 NAA50Q9GZZ1 169 aaKnown RBP8.6□□□□□ -1.03
UBR4-208ENST00000459947 IFI27L2Q9H2X8 130 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 KCNAB3O43448 404 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 SPDEFO95238 335 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 GSTT2P0CG29 244 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 GSTT2BP0CG30 244 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 NAT1P18440 290 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 LSAMPQ13449 338 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 GNMTQ14749 295 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 PIFOQ8TCI5 191 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 C17orf50Q8WW18 174 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 LEAP2Q969E1 77 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 ST6GALNAC5Q9BVH7 336 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 TNFRSF19Q9NS68 423 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 SNRNP70P08621 437 aaKnown RBP8.59□□□□□ -1.03
UBR4-208ENST00000459947 S100GP29377 79 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 KIR2DS2P43631 304 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 OR3A3P47888 321 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 CDK10Q15131 360 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 TSNAXQ99598 290 aaKnown RBP8.59□□□□□ -1.03
UBR4-208ENST00000459947 WASHC3Q9Y3C0 194 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 CEPT1Q9Y6K0 416 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 H3BMQ9 156 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 BET1O15155 118 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 PTBP1P26599 531 aaKnown RBP eCLIP8.59□□□□□ -1.03
UBR4-208ENST00000459947 PYHIN1Q6K0P9 492 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 PDPNQ86YL7 162 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 UBALD1Q8TB05 177 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 DUX5Q96PT3 197 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 NABP2Q9BQ15 211 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 GON7Q9BXV9 100 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 MMP27Q9H306 513 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 KIAA1456Q9P272 454 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 ZNF580Q9UK33 172 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 OR2W1Q9Y3N9 320 aa8.59□□□□□ -1.03
UBR4-208ENST00000459947 TGFBR1P36897 503 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 HERV-K104P61576 105 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 Q6ZSV7 163 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 TMEM17Q86X19 198 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 OR5H2Q8NGV7 314 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 OR56B4Q8NH76 319 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 LIN7CQ9NUP9 197 aaKnown RBP8.58□□□□□ -1.04
UBR4-208ENST00000459947 MRPS7Q9Y2R9 242 aaKnown RBP8.58□□□□□ -1.04
UBR4-208ENST00000459947 SSX5O60225 188 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 PEX14O75381 377 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 EIF4EP06730 217 aaKnown RBP8.58□□□□□ -1.04
UBR4-208ENST00000459947 S100A5P33763 92 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 SPCS2Q15005 226 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 RTL8BQ17RB0 113 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 LDLRAD2Q5SZI1 272 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 OR5AP2Q8NGF4 316 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 GPX8Q8TED1 209 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 AIFM2Q9BRQ8 373 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 TAS2R8Q9NYW2 309 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 EXTL2Q9UBQ6 330 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 RNF114Q9Y508 228 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 SAA2-SAA4A0A096LPE2 208 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 A0A1W2PPE3 182 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 SLC31A2O15432 143 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 RGS5O15539 181 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 SAA2P0DJI9 122 aaPredicted RBP8.58□□□□□ -1.04
UBR4-208ENST00000459947 LPCAT3Q6P1A2 487 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 MCFD2Q8NI22 146 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 ZNF251Q9BRH9 671 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 OR1A1Q9P1Q5 309 aa8.58□□□□□ -1.04
UBR4-208ENST00000459947 CTDSPLO15194 276 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 CREBL2O60519 120 aaPredicted RBP8.57□□□□□ -1.04
UBR4-208ENST00000459947 HPGDSO60760 199 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 IGKV1D-33P01593 117 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 IGKV1-33P01594 117 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 VDAC2P45880 294 aaPredicted RBP8.57□□□□□ -1.04
UBR4-208ENST00000459947 COMMD1Q8N668 190 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 EAF1Q96JC9 268 aaPredicted RBP8.57□□□□□ -1.04
UBR4-208ENST00000459947 PRELID3BQ9Y3B1 194 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 HLA-DQB1P01920 261 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 ELK1P19419 428 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 Q8N6K4 173 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 GIMAP1Q8WWP7 306 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 RASL11BQ9BPW5 248 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 NXF2Q9GZY0 626 aaKnown RBP8.57□□□□□ -1.04
UBR4-208ENST00000459947 CSMD2Q7Z408 3487 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 TUSC2O75896 110 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 ZNF66Q6ZN08 573 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms