RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 KDF1Q8NAX2 398 aaPredicted RBP13.95□□□□□ -0.18
CCDC43-202ENST00000457422 OR13A1Q8NGR1 328 aa13.95□□□□□ -0.18
CCDC43-202ENST00000457422 CRYAAP02489 173 aa13.94□□□□□ -0.18
CCDC43-202ENST00000457422 SSTR5P35346 364 aa13.94□□□□□ -0.18
CCDC43-202ENST00000457422 HTD2P86397 168 aa13.94□□□□□ -0.18
CCDC43-202ENST00000457422 KRTCAP3Q53RY4 240 aa13.94□□□□□ -0.18
CCDC43-202ENST00000457422 DPPA3Q6W0C5 159 aa13.94□□□□□ -0.18
CCDC43-202ENST00000457422 ZNF808Q8N4W9 903 aaPredicted RBP13.94□□□□□ -0.18
CCDC43-202ENST00000457422 EIF5A2Q9GZV4 153 aaKnown RBP13.94□□□□□ -0.18
CCDC43-202ENST00000457422 PSENENQ9NZ42 101 aa13.94□□□□□ -0.18
CCDC43-202ENST00000457422 IGLV3-9A0A075B6K5 115 aa13.94□□□□□ -0.18
CCDC43-202ENST00000457422 C15orf65H3BRN8 121 aa13.94□□□□□ -0.18
CCDC43-202ENST00000457422 ADH4P08319 380 aa13.94□□□□□ -0.18
CCDC43-202ENST00000457422 IAPPP10997 89 aa13.94□□□□□ -0.18
CCDC43-202ENST00000457422 RPL30P62888 115 aaKnown RBP13.94□□□□□ -0.18
CCDC43-202ENST00000457422 FAM122CQ6P4D5 195 aa13.94□□□□□ -0.18
CCDC43-202ENST00000457422 SPSB3Q6PJ21 355 aa13.94□□□□□ -0.18
CCDC43-202ENST00000457422 FAM57AQ8TBR7 257 aa13.94□□□□□ -0.18
CCDC43-202ENST00000457422 MUCL1Q96DR8 90 aa13.94□□□□□ -0.18
CCDC43-202ENST00000457422 ABHD14AQ9BUJ0 271 aa13.94□□□□□ -0.18
CCDC43-202ENST00000457422 LAMA5O15230 3695 aa13.93□□□□□ -0.18
CCDC43-202ENST00000457422 A0A1B0GV50 99 aa13.93□□□□□ -0.18
CCDC43-202ENST00000457422 MEX3AA1L020 520 aaKnown RBP13.93□□□□□ -0.18
CCDC43-202ENST00000457422 RUNX1Q01196 453 aa13.93□□□□□ -0.18
CCDC43-202ENST00000457422 ZNF66Q6ZN08 573 aa13.93□□□□□ -0.18
CCDC43-202ENST00000457422 GCSAMQ8N6F7 178 aa13.93□□□□□ -0.18
CCDC43-202ENST00000457422 FAM216AQ8WUB2 273 aa13.93□□□□□ -0.18
CCDC43-202ENST00000457422 CACNA1DQ01668 2161 aa13.93□□□□□ -0.18
CCDC43-202ENST00000457422 CEP250Q9BV73 2442 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 IGKV1D-17A0A075B6S4 117 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 SPINT2O43291 252 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 RAMP3O60896 148 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 IFNA5P01569 189 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 KLF3P57682 345 aaPredicted RBP13.92□□□□□ -0.18
CCDC43-202ENST00000457422 EDDM3AQ14507 147 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 CR1LQ2VPA4 569 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 SPRNQ5BIV9 151 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 OR2B11Q5JQS5 317 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 VHLLQ6RSH7 139 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 MEGF10Q96KG7 1140 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 DCTN5Q9BTE1 182 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 USF3Q68DE3 2245 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 GVINP1Q7Z2Y8 2422 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 IGHV3-43A0A0B4J1X8 118 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 IGHV3-43DP0DP04 118 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 NFYBP25208 207 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 UBE2KP61086 200 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 AKR1C8PQ5T2L2 129 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 ZNF525Q8N782 197 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 PPP1R35Q8TAP8 253 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 SNX22Q96L94 193 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 OR2V2Q96R30 315 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 AGMATQ9BSE5 352 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 SLC35B3Q9H1N7 401 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 KCNJ16Q9NPI9 418 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 KIAA1456Q9P272 454 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 HSPB7Q9UBY9 170 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 MGAQ8IWI9 3026 aa13.92□□□□□ -0.18
CCDC43-202ENST00000457422 MUC6Q6W4X9 2439 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 OR8U8P0C7N1 319 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 CTRB1P17538 263 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 BRWD1-AS2P59051 145 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 HBG1P69891 147 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 HBG2P69892 147 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 TNFRSF9Q07011 255 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 CTRB2Q6GPI1 263 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 BTNL3Q6UXE8 466 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 RFESDQ8TAC1 157 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 PARD6GQ9BYG4 376 aaPredicted RBP13.91□□□□□ -0.18
CCDC43-202ENST00000457422 LAMP3Q9UQV4 416 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 IGHV3OR15-7A0A075B7D8 119 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 H7C2Y5 167 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 MGST3O14880 152 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 GPR37O15354 613 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 PPIHO43447 177 aaKnown RBP13.91□□□□□ -0.18
CCDC43-202ENST00000457422 LHBP01229 141 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 METTL15P1P0C7V9 234 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 GZMHP20718 246 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 RPS23P62266 143 aaKnown RBP13.91□□□□□ -0.18
CCDC43-202ENST00000457422 ARL16Q0P5N6 197 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 ZNF816Q0VGE8 651 aaPredicted RBP13.91□□□□□ -0.18
CCDC43-202ENST00000457422 HAPLN4Q86UW8 402 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 MOGAT3Q86VF5 341 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 TCTEX1D2Q8WW35 142 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 HSD17B10Q99714 261 aaKnown RBP13.91□□□□□ -0.18
CCDC43-202ENST00000457422 FBXO7Q9Y3I1 522 aa13.91□□□□□ -0.18
CCDC43-202ENST00000457422 ODAMA1E959 279 aa13.9□□□□□ -0.18
CCDC43-202ENST00000457422 C17orf98A8MV24 154 aa13.9□□□□□ -0.18
CCDC43-202ENST00000457422 A8MXE2 369 aa13.9□□□□□ -0.18
CCDC43-202ENST00000457422 ATP6V1G2-DDX39BF2Z307 99 aa13.9□□□□□ -0.18
CCDC43-202ENST00000457422 S1PR2O95136 353 aa13.9□□□□□ -0.18
CCDC43-202ENST00000457422 CLDN1O95832 211 aa13.9□□□□□ -0.18
CCDC43-202ENST00000457422 PAX6P26367 422 aa13.9□□□□□ -0.18
CCDC43-202ENST00000457422 GATA4P43694 442 aa13.9□□□□□ -0.18
CCDC43-202ENST00000457422 FLI1Q01543 452 aaPredicted RBP13.9□□□□□ -0.18
CCDC43-202ENST00000457422 TLE4Q04727 773 aa13.9□□□□□ -0.18
CCDC43-202ENST00000457422 FAM180AQ6UWF9 173 aa13.9□□□□□ -0.18
CCDC43-202ENST00000457422 TMEM14EPQ6UXP3 125 aa13.9□□□□□ -0.18
CCDC43-202ENST00000457422 EDARADDQ8WWZ3 215 aa13.9□□□□□ -0.18
CCDC43-202ENST00000457422 PSMG3Q9BT73 122 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms