RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 CTXND1A0A1B0GTU2 59 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 C11orf94C9JXX5 98 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 MLNRO43193 412 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 TRAPPC6AO75865 159 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 WNT2P09544 360 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 SOX8P57073 446 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 PPP1CBP62140 327 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 SGMS2Q8NHU3 365 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 NEIL1Q96FI4 390 aaPredicted RBP8.74□□□□□ -1.01
CLIP4-208ENST00000456385 C20orf144Q9BQM9 153 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 HSPB9Q9BQS6 159 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 WNT5BQ9H1J7 359 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 PATZ1Q9HBE1 687 aaKnown RBP8.74□□□□□ -1.01
CLIP4-208ENST00000456385 COL6A3P12111 3177 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 A0A0J9YW62 118 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 EPOPA6NHQ4 379 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 LMO7DNF2Z398 122 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 RBFOX2O43251 390 aaKnown RBP eCLIP8.74□□□□□ -1.01
CLIP4-208ENST00000456385 CLDN1O95832 211 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 UMODP07911 640 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 CELA2AP08217 269 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 CD82P27701 267 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 UBE2G2P60604 165 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 TFF3Q07654 80 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 PRDX4Q13162 271 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 ZNF585BQ52M93 769 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 ANKRD39Q53RE8 183 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 FFAR4Q5NUL3 377 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 TMPRSS7Q7RTY8 843 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 RDH5Q92781 318 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 CLDN23Q96B33 292 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 ZNF488Q96MN9 340 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 TMEM38BQ9NVV0 291 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 ELOVL5Q9NYP7 299 aa8.74□□□□□ -1.01
CLIP4-208ENST00000456385 F2Z2F3 143 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 DKK1O94907 266 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 NDUFB4O95168 129 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 VAMP5O95183 116 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 VENTXO95231 258 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 CTXN2P0C2S0 81 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 HNF1AP20823 631 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 S100GP29377 79 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 CLDN15P56746 228 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 FGF12P61328 243 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 GNB1P62873 340 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 SRSF7Q16629 238 aaKnown RBP eCLIP8.73□□□□□ -1.01
CLIP4-208ENST00000456385 SLC23A3Q6PIS1 610 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 C7orf61Q8IZ16 206 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 CARFQ8N187 725 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 OR1L1Q8NH94 360 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 LSM10Q969L4 123 aaKnown RBP8.73□□□□□ -1.01
CLIP4-208ENST00000456385 SGCZQ96LD1 299 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 OR2H1Q9GZK4 316 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 OR51B6Q9H340 312 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 MSL2Q9HCI7 577 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 DNAJC4Q9NNZ3 241 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 RNF114Q9Y508 228 aa8.73□□□□□ -1.01
CLIP4-208ENST00000456385 SYNGR1O43759 233 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 DUX1O43812 170 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 ZIC3O60481 467 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 SERF1AO75920 110 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 CCL2P13500 99 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 CBLN1P23435 193 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 ATP5G3P48201 142 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 VEGFBP49765 207 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 UBE2NP61088 152 aaKnown RBP8.72□□□□□ -1.01
CLIP4-208ENST00000456385 MMDQ15546 238 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 KRTAP27-1Q3LI81 207 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 C11orf42Q8N5U0 333 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 Q8NFD4 153 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 OR56B2PQ8NGI1 322 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 VAMP8Q9BV40 100 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 DEFB126Q9BYW3 111 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 ZDHHC11Q9H8X9 412 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 AKIRIN1Q9H9L7 192 aaPredicted RBP8.72□□□□□ -1.01
CLIP4-208ENST00000456385 CABIN1Q9Y6J0 2220 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 IGLV3-12A0A075B6K2 115 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 WDR1O75083 606 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 FRMD6-AS1P0C7T7 363 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 CCNOP22674 350 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 COMPP49747 757 aaPredicted RBP8.72□□□□□ -1.01
CLIP4-208ENST00000456385 RAB7AP51149 207 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 TMEM183BQ1AE95 376 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 GCSAMLQ5JQS6 135 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 TMEM14EPQ6UXP3 125 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 NUFIP2Q7Z417 695 aaKnown RBP8.72□□□□□ -1.01
CLIP4-208ENST00000456385 CPEB3Q8NE35 698 aaKnown RBP8.72□□□□□ -1.01
CLIP4-208ENST00000456385 TMEM204Q9BSN7 226 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 PARD6GQ9BYG4 376 aaPredicted RBP8.72□□□□□ -1.01
CLIP4-208ENST00000456385 ASCL3Q9NQ33 180 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 TMEM9BQ9NQ34 198 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 RYDENQ9NUL5 291 aaKnown RBP8.72□□□□□ -1.01
CLIP4-208ENST00000456385 FOXJ2Q9P0K8 574 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 CLN8Q9UBY8 286 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 DMDP11532 3685 aa8.72□□□□□ -1.01
CLIP4-208ENST00000456385 TRBV20OR9-2A0A075B6H5 130 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 A0A1W2PR77 199 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 FAM90A10PA6NDY2 464 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 FAM90A18PA6NE21 464 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 FAM90A16PA6NEW6 464 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms