RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 CMSS1Q9BQ75 279 aaKnown RBP14.06□□□□□ -0.16
MSH6-207ENST00000456246 MCRIP2Q9BUT9 160 aaKnown RBP14.06□□□□□ -0.16
MSH6-207ENST00000456246 ZNF107Q9UII5 783 aaPredicted RBP14.06□□□□□ -0.16
MSH6-207ENST00000456246 RAB22AQ9UL26 194 aa14.06□□□□□ -0.16
MSH6-207ENST00000456246 TRDV1A0A1B0GX56 115 aa14.05□□□□□ -0.16
MSH6-207ENST00000456246 LDLRAD4O15165 306 aa14.05□□□□□ -0.16
MSH6-207ENST00000456246 HSPA12AO43301 675 aa14.05□□□□□ -0.16
MSH6-207ENST00000456246 THBS3P49746 956 aa14.05□□□□□ -0.16
MSH6-207ENST00000456246 TMEM50BP56557 158 aa14.05□□□□□ -0.16
MSH6-207ENST00000456246 CLDN12P56749 244 aa14.05□□□□□ -0.16
MSH6-207ENST00000456246 FOXB2Q5VYV0 432 aa14.05□□□□□ -0.16
MSH6-207ENST00000456246 Q6ZPA2 131 aa14.05□□□□□ -0.16
MSH6-207ENST00000456246 RNF152Q8N8N0 203 aa14.05□□□□□ -0.16
MSH6-207ENST00000456246 FCGR1BQ92637 280 aa14.05□□□□□ -0.16
MSH6-207ENST00000456246 DPF1Q92782 380 aa14.05□□□□□ -0.16
MSH6-207ENST00000456246 ARHGAP5-AS1Q96IT6 56 aa14.05□□□□□ -0.16
MSH6-207ENST00000456246 PECRQ9BY49 303 aa14.05□□□□□ -0.16
MSH6-207ENST00000456246 Q9N2K0 584 aa14.05□□□□□ -0.16
MSH6-207ENST00000456246 KIAA1456Q9P272 454 aa14.05□□□□□ -0.16
MSH6-207ENST00000456246 OR5H14A6NHG9 310 aa14.04□□□□□ -0.16
MSH6-207ENST00000456246 LINC01548A6NM66 108 aa14.04□□□□□ -0.16
MSH6-207ENST00000456246 NBR2O15453 112 aa14.04□□□□□ -0.16
MSH6-207ENST00000456246 ST8SIA5O15466 376 aa14.04□□□□□ -0.16
MSH6-207ENST00000456246 IGHG4P01861 327 aa14.04□□□□□ -0.16
MSH6-207ENST00000456246 HLA-DRB1P01911 266 aa14.04□□□□□ -0.16
MSH6-207ENST00000456246 GADD45AP24522 165 aa14.04□□□□□ -0.16
MSH6-207ENST00000456246 MC5RP33032 325 aa14.04□□□□□ -0.16
MSH6-207ENST00000456246 OR3A3P47888 321 aa14.04□□□□□ -0.16
MSH6-207ENST00000456246 SERPINB10P48595 397 aa14.04□□□□□ -0.16
MSH6-207ENST00000456246 ETV3LQ6ZN32 361 aa14.04□□□□□ -0.16
MSH6-207ENST00000456246 C5orf24Q7Z6I8 188 aa14.04□□□□□ -0.16
MSH6-207ENST00000456246 MRPL41Q8IXM3 137 aaKnown RBP14.04□□□□□ -0.16
MSH6-207ENST00000456246 HSPB9Q9BQS6 159 aa14.04□□□□□ -0.16
MSH6-207ENST00000456246 HDHD3Q9BSH5 251 aaPredicted RBP14.04□□□□□ -0.16
MSH6-207ENST00000456246 YTHDF1Q9BYJ9 559 aaKnown RBP14.04□□□□□ -0.16
MSH6-207ENST00000456246 TMEM272A0A1B0GTI8 110 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 IFITM5A6NNB3 132 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 RBBP9O75884 186 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 NDUFA3O95167 84 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 SLC2A2P11168 524 aaPredicted RBP14.03□□□□□ -0.16
MSH6-207ENST00000456246 RAB3BP20337 219 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 RAB6AP20340 208 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 CEACAM6P40199 344 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 CFHR3Q02985 330 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 C5orf64Q2M2E5 130 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 HES5Q5TA89 166 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 UBE2UQ5VVX9 321 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 C8orf86Q6ZUL3 223 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 NPBQ8NG41 125 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 MRAPQ8TCY5 172 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 PTX4Q96A99 478 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 RAB3CQ96E17 227 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 P2RX4Q99571 388 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 CENPOQ9BU64 300 aa14.03□□□□□ -0.16
MSH6-207ENST00000456246 AURKAIP1Q9NWT8 199 aaPredicted RBP14.03□□□□□ -0.16
MSH6-207ENST00000456246 DIRAS3O95661 229 aa14.02□□□□□ -0.17
MSH6-207ENST00000456246 PRB2P02812 416 aaPredicted RBP14.02□□□□□ -0.17
MSH6-207ENST00000456246 CD3GP09693 182 aa14.02□□□□□ -0.17
MSH6-207ENST00000456246 CDX1P47902 265 aaPredicted RBP14.02□□□□□ -0.17
MSH6-207ENST00000456246 KIR2DS1Q14954 304 aa14.02□□□□□ -0.17
MSH6-207ENST00000456246 ARL6IP1Q15041 203 aa14.02□□□□□ -0.17
MSH6-207ENST00000456246 PLAC9Q5JTB6 97 aa14.02□□□□□ -0.17
MSH6-207ENST00000456246 FAM131AQ6UXB0 335 aa14.02□□□□□ -0.17
MSH6-207ENST00000456246 OR4A4PQ8NGN8 299 aa14.02□□□□□ -0.17
MSH6-207ENST00000456246 OR8U1Q8NH10 309 aa14.02□□□□□ -0.17
MSH6-207ENST00000456246 KCTD7Q96MP8 289 aa14.02□□□□□ -0.17
MSH6-207ENST00000456246 RNF5Q99942 180 aa14.02□□□□□ -0.17
MSH6-207ENST00000456246 AGMATQ9BSE5 352 aa14.02□□□□□ -0.17
MSH6-207ENST00000456246 ZMAT5Q9UDW3 170 aaKnown RBP14.02□□□□□ -0.17
MSH6-207ENST00000456246 METTL21EPA6NDL7 271 aa14.01□□□□□ -0.17
MSH6-207ENST00000456246 TRDCB7Z8K6 153 aa14.01□□□□□ -0.17
MSH6-207ENST00000456246 RPLP1P05386 114 aaKnown RBP14.01□□□□□ -0.17
MSH6-207ENST00000456246 SCTP09683 121 aa14.01□□□□□ -0.17
MSH6-207ENST00000456246 PSMB8P28062 276 aa14.01□□□□□ -0.17
MSH6-207ENST00000456246 RPL39P5Q59GN2 51 aa14.01□□□□□ -0.17
MSH6-207ENST00000456246 LIN54Q6MZP7 749 aa14.01□□□□□ -0.17
MSH6-207ENST00000456246 OR5AN1Q8NGI8 311 aa14.01□□□□□ -0.17
MSH6-207ENST00000456246 C11orf54Q9H0W9 315 aaPredicted RBP14.01□□□□□ -0.17
MSH6-207ENST00000456246 OR51J1Q9H342 316 aa14.01□□□□□ -0.17
MSH6-207ENST00000456246 OR1A1Q9P1Q5 309 aa14.01□□□□□ -0.17
MSH6-207ENST00000456246 ZNF221Q9UK13 617 aa14.01□□□□□ -0.17
MSH6-207ENST00000456246 WASHC3Q9Y3C0 194 aa14.01□□□□□ -0.17
MSH6-207ENST00000456246 H0YJW9 148 aa14□□□□□ -0.17
MSH6-207ENST00000456246 CCL24O00175 119 aa14□□□□□ -0.17
MSH6-207ENST00000456246 CT45A6P0DMU7 189 aa14□□□□□ -0.17
MSH6-207ENST00000456246 CT45A5P0DMU8 189 aa14□□□□□ -0.17
MSH6-207ENST00000456246 CT45A7P0DMV0 189 aa14□□□□□ -0.17
MSH6-207ENST00000456246 PSMB9P28065 219 aa14□□□□□ -0.17
MSH6-207ENST00000456246 FGF9P31371 208 aaPredicted RBP14□□□□□ -0.17
MSH6-207ENST00000456246 OR10A3P58181 314 aa14□□□□□ -0.17
MSH6-207ENST00000456246 C22orf42Q6IC83 251 aa14□□□□□ -0.17
MSH6-207ENST00000456246 SPARTQ8N0X7 666 aa14□□□□□ -0.17
MSH6-207ENST00000456246 ZNF436-AS1Q8NC38 126 aaPredicted RBP14□□□□□ -0.17
MSH6-207ENST00000456246 OR10R2Q8NGX6 335 aa14□□□□□ -0.17
MSH6-207ENST00000456246 ABHD14BQ96IU4 210 aa14□□□□□ -0.17
MSH6-207ENST00000456246 PARP12Q9H0J9 701 aaKnown RBP14□□□□□ -0.17
MSH6-207ENST00000456246 IGHV7-81A0A0B4J1V7 117 aa13.99□□□□□ -0.17
MSH6-207ENST00000456246 SHISA3A0PJX4 238 aa13.99□□□□□ -0.17
MSH6-207ENST00000456246 H7C2Y5 167 aa13.99□□□□□ -0.17
MSH6-207ENST00000456246 MFNGO00587 321 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms