RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ADAP1O75689 374 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 SPP1P10451 314 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 HOXB4P17483 251 aaPredicted RBP4.02□□□□□ -1.77
RIF1-207ENST00000454583 AADACP22760 399 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 PAX6P26367 422 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 GNG2P59768 71 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 PLP2Q04941 152 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 MEF2CQ06413 473 aaPredicted RBP4.02□□□□□ -1.77
RIF1-207ENST00000454583 OR8G1Q15617 311 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 POU2AF1Q16633 256 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 ETV3LQ6ZN32 361 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 MOGAT3Q86VF5 341 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 FAM71E2Q8N5Q1 922 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 OR8S1Q8NH09 359 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 MUCL1Q96DR8 90 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 ELMOD3Q96FG2 381 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 KIRREL1Q96J84 757 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 C2orf50Q96LR7 162 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 YPEL2Q96QA6 119 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 PAPOLGQ9BWT3 736 aaKnown RBP4.02□□□□□ -1.77
RIF1-207ENST00000454583 EGLN1Q9GZT9 426 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 PATZ1Q9HBE1 687 aaKnown RBP4.02□□□□□ -1.77
RIF1-207ENST00000454583 BEX1Q9HBH7 125 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 COA4Q9NYJ1 87 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 PRR13Q9NZ81 148 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 RNF7Q9UBF6 113 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 ZNF580Q9UK33 172 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 MMP24Q9Y5R2 645 aa4.02□□□□□ -1.77
RIF1-207ENST00000454583 DOCK11Q5JSL3 2073 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 IGHV4-30-2A0A087WSY4 118 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 hCG_1807616A0A1W2PRN6 198 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 NKX6-3A6NJ46 265 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 H0Y980 276 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 LGALS8O00214 317 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 LY6HO94772 140 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 PPYP01298 95 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 IGKV1-5P01602 117 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 HCKP08631 526 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 SCTP09683 121 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 SERPINA2P20848 420 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 PRDX2P32119 198 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 CD80P33681 288 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 FABP6P51161 128 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 DYNLT3P51808 116 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 CFHR3Q02985 330 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 RNASE10Q5GAN6 216 aaKnown RBP4.01□□□□□ -1.77
RIF1-207ENST00000454583 MEX3BQ6ZN04 569 aaKnown RBP4.01□□□□□ -1.77
RIF1-207ENST00000454583 Q6ZRM9 215 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 UBAC2Q8NBM4 344 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 CCDC107Q8WV48 283 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 EDARADDQ8WWZ3 215 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 RDH5Q92781 318 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 URM1Q9BTM9 101 aaKnown RBP4.01□□□□□ -1.77
RIF1-207ENST00000454583 C12orf4Q9NQ89 552 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 TAS2R3Q9NYW6 316 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 ANKRD17O75179 2603 aaKnown RBP4.01□□□□□ -1.77
RIF1-207ENST00000454583 INS-IGF2F8WCM5 200 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 PHOX2AO14813 284 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 SLC31A2O15432 143 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 KCNAB3O43448 404 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 IGHV4-31P0DP07 118 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 PSMB6P28072 239 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 UBA52P62987 128 aaKnown RBP4.01□□□□□ -1.77
RIF1-207ENST00000454583 SRSF3P84103 164 aaKnown RBP4.01□□□□□ -1.77
RIF1-207ENST00000454583 MORN2Q502X0 79 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 CIARTQ8N365 385 aaPredicted RBP4.01□□□□□ -1.77
RIF1-207ENST00000454583 FAM216BQ8N7L0 139 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 OR2Z1Q8NG97 314 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 OR5D18Q8NGL1 313 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 OR4P4Q8NGL7 312 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 LINC00052Q96N35 136 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 NECAP2Q9NVZ3 263 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 COQ3Q9NZJ6 369 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 SH3BGRL2Q9UJC5 107 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 LINC00312Q9Y6C7 94 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 IGHV4-61A0A0C4DH41 118 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 A0A1W2PPI3 338 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 C9JQL5 133 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 DNASE2O00115 360 aaPredicted RBP4.01□□□□□ -1.77
RIF1-207ENST00000454583 ARG1P05089 322 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 EPHA1P21709 976 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 COL8A1P27658 744 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 NPY4RP50391 375 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 HLA-DRB3P79483 266 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 TNFAIP6P98066 277 aaPredicted RBP4.01□□□□□ -1.77
RIF1-207ENST00000454583 FGL1Q08830 312 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 DEFB113Q30KQ7 82 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 LCE2AQ5TA79 106 aaPredicted RBP4.01□□□□□ -1.77
RIF1-207ENST00000454583 OR11L1Q8NGX0 322 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 LRRC29Q8WV35 223 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 TMEM170AQ8WVE7 144 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 ZNF2Q9BSG1 426 aaPredicted RBP4.01□□□□□ -1.77
RIF1-207ENST00000454583 SUCNR1Q9BXA5 334 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 NDRG3Q9UGV2 375 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 UBQLN2Q9UHD9 624 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 DMRT1Q9Y5R6 373 aa4.01□□□□□ -1.77
RIF1-207ENST00000454583 ANKHD1Q8IWZ3 2542 aaKnown RBP4□□□□□ -1.77
RIF1-207ENST00000454583 LYNX1G3V0Z9 82 aa4□□□□□ -1.77
RIF1-207ENST00000454583 M0R233 179 aa4□□□□□ -1.77
RIF1-207ENST00000454583 CCSO14618 274 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms