RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 TERB2Q8NHR7 220 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 FAM216AQ8WUB2 273 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 C17orf50Q8WW18 174 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 GIMAP1Q8WWP7 306 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 AJUBAQ96IF1 538 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 ZNF2Q9BSG1 426 aaPredicted RBP10.59□□□□□ -0.71
VPS33A-202ENST00000451053 OR2S2Q9NQN1 319 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 GNG12Q9UBI6 72 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 SLC23A1Q9UHI7 598 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 PSG11Q9UQ72 335 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 NUBP2Q9Y5Y2 271 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 MDFIC2A0A1B0GVS7 189 aa10.58□□□□□ -0.72
VPS33A-202ENST00000451053 NDUFB6O95139 128 aa10.58□□□□□ -0.72
VPS33A-202ENST00000451053 TCRBP04435 133 aa10.58□□□□□ -0.72
VPS33A-202ENST00000451053 PPP1CCP36873 323 aaKnown RBP10.58□□□□□ -0.72
VPS33A-202ENST00000451053 CCR6P51684 374 aa10.58□□□□□ -0.72
VPS33A-202ENST00000451053 BPIFB3P59826 476 aa10.58□□□□□ -0.72
VPS33A-202ENST00000451053 HERPUD1Q15011 391 aa10.58□□□□□ -0.72
VPS33A-202ENST00000451053 SURF2Q15527 256 aaPredicted RBP10.58□□□□□ -0.72
VPS33A-202ENST00000451053 MIDNQ504T8 468 aa10.58□□□□□ -0.72
VPS33A-202ENST00000451053 LDLRAD2Q5SZI1 272 aa10.58□□□□□ -0.72
VPS33A-202ENST00000451053 CCBE1Q6UXH8 406 aaPredicted RBP10.58□□□□□ -0.72
VPS33A-202ENST00000451053 LHFPL1Q86WI0 220 aa10.58□□□□□ -0.72
VPS33A-202ENST00000451053 CENPSQ8N2Z9 138 aa10.58□□□□□ -0.72
VPS33A-202ENST00000451053 OR4P4Q8NGL7 312 aa10.58□□□□□ -0.72
VPS33A-202ENST00000451053 OR9G1Q8NH87 305 aa10.58□□□□□ -0.72
VPS33A-202ENST00000451053 CREB3L1Q96BA8 519 aa10.58□□□□□ -0.72
VPS33A-202ENST00000451053 ZNF48Q96MX3 618 aaPredicted RBP10.58□□□□□ -0.72
VPS33A-202ENST00000451053 OCEL1Q9H607 264 aa10.58□□□□□ -0.72
VPS33A-202ENST00000451053 OR1A1Q9P1Q5 309 aa10.58□□□□□ -0.72
VPS33A-202ENST00000451053 TEP1Q99973 2627 aaKnown RBP10.57□□□□□ -0.72
VPS33A-202ENST00000451053 J3QR06 171 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 TOR1AO14656 332 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 SLC31A2O15432 143 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 IGLV1-47P01700 117 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 PAX6P26367 422 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 TUSC1Q2TAM9 212 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 HLA-DRB5Q30154 266 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 DEFB112Q30KQ8 113 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 MORN2Q502X0 79 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 ZNF660Q6AZW8 331 aaPredicted RBP10.57□□□□□ -0.72
VPS33A-202ENST00000451053 LPCAT3Q6P1A2 487 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 H1FOOQ8IZA3 346 aaPredicted RBP10.57□□□□□ -0.72
VPS33A-202ENST00000451053 ZDHHC22Q8N966 263 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 ZNF439Q8NDP4 499 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 BEND2Q8NDZ0 799 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 EDARADDQ8WWZ3 215 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 MOB3AQ96BX8 217 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 TOLLIPQ9H0E2 274 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 PARP12Q9H0J9 701 aaKnown RBP10.57□□□□□ -0.72
VPS33A-202ENST00000451053 C20orf85Q9H1P6 137 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 OR2W1Q9Y3N9 320 aa10.57□□□□□ -0.72
VPS33A-202ENST00000451053 YPEL1O60688 119 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 TUSC2O75896 110 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 PPYP01298 95 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 NFYAP23511 347 aaPredicted RBP10.56□□□□□ -0.72
VPS33A-202ENST00000451053 CEACAM6P40199 344 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 ZNF134P52741 427 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 PRRX1P54821 245 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 RAG2P55895 527 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 UCP3P55916 312 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 LGALS4P56470 323 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 SCGB2A2Q13296 93 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 LY6G6FQ5SQ64 297 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 DYNAPQ8N1N2 210 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 SIGLECL1Q8N7X8 197 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 OR13C8Q8NGS7 320 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 ZNF596Q8TC21 504 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 ZFAND1Q8TCF1 268 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 YPEL2Q96QA6 119 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 MARVELD1Q9BSK0 173 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 MMP28Q9H239 520 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 NUDT15Q9NV35 164 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 RDH8Q9NYR8 311 aa10.56□□□□□ -0.72
VPS33A-202ENST00000451053 TBL2Q9Y4P3 447 aaKnown RBP10.56□□□□□ -0.72
VPS33A-202ENST00000451053 NSD1Q96L73 2696 aaPredicted RBP10.56□□□□□ -0.72
VPS33A-202ENST00000451053 ITGB1BP1O14713 200 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 DHFRP00374 187 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 H2AFB2P0C5Z0 115 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 PGAM2P15259 253 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 AADACP22760 399 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 HTR1DP28221 377 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 S100GP29377 79 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 LUMP51884 338 aaPredicted RBP10.55□□□□□ -0.72
VPS33A-202ENST00000451053 TAS2R31P59538 309 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 Q3ZCU0 254 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 CT45A1Q5HYN5 189 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 MINOS1Q5TGZ0 78 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 AADACL3Q5VUY0 350 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 SLC25A48Q6ZT89 311 aaKnown RBP10.55□□□□□ -0.72
VPS33A-202ENST00000451053 SLC38A6Q8IZM9 456 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 LINC00311Q8N616 119 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 C8orf31Q8N9H6 132 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 OR2AK2Q8NG84 335 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 CT45A3Q8NHU0 189 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 C14orf166Q9Y224 244 aaKnown RBP10.55□□□□□ -0.72
VPS33A-202ENST00000451053 FAM96BQ9Y3D0 163 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 RBM7Q9Y580 266 aaKnown RBP10.55□□□□□ -0.72
VPS33A-202ENST00000451053 MINOS1-NBL1R4GNA1 71 aa10.55□□□□□ -0.72
VPS33A-202ENST00000451053 TRAV6A0A075B6T7 132 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms