RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 FCGR1BQ92637 280 aa12.24□□□□□ -0.45
LIMS1-210ENST00000449684 RAB3CQ96E17 227 aa12.24□□□□□ -0.45
LIMS1-210ENST00000449684 NABP2Q9BQ15 211 aa12.24□□□□□ -0.45
LIMS1-210ENST00000449684 GHITMQ9H3K2 345 aa12.24□□□□□ -0.45
LIMS1-210ENST00000449684 Q9N2K0 584 aa12.24□□□□□ -0.45
LIMS1-210ENST00000449684 ZNF107Q9UII5 783 aaPredicted RBP12.24□□□□□ -0.45
LIMS1-210ENST00000449684 A0A075B6Q4 140 aa12.23□□□□□ -0.45
LIMS1-210ENST00000449684 PRB2P02812 416 aaPredicted RBP12.23□□□□□ -0.45
LIMS1-210ENST00000449684 IGLL1P15814 213 aa12.23□□□□□ -0.45
LIMS1-210ENST00000449684 GALP22466 123 aa12.23□□□□□ -0.45
LIMS1-210ENST00000449684 UBE2UQ5VVX9 321 aa12.23□□□□□ -0.45
LIMS1-210ENST00000449684 FAM71F2Q6NXP2 309 aa12.23□□□□□ -0.45
LIMS1-210ENST00000449684 CD200R1LQ6Q8B3 271 aa12.23□□□□□ -0.45
LIMS1-210ENST00000449684 FAM71E2Q8N5Q1 922 aa12.23□□□□□ -0.45
LIMS1-210ENST00000449684 WFDC9Q8NEX5 89 aa12.23□□□□□ -0.45
LIMS1-210ENST00000449684 RBMXL1Q96E39 390 aaKnown RBP12.23□□□□□ -0.45
LIMS1-210ENST00000449684 IFI27L2Q9H2X8 130 aa12.23□□□□□ -0.45
LIMS1-210ENST00000449684 OR1A1Q9P1Q5 309 aa12.23□□□□□ -0.45
LIMS1-210ENST00000449684 ZNF221Q9UK13 617 aa12.23□□□□□ -0.45
LIMS1-210ENST00000449684 SSR3Q9UNL2 185 aa12.23□□□□□ -0.45
LIMS1-210ENST00000449684 TGP01266 2768 aa12.22□□□□□ -0.45
LIMS1-210ENST00000449684 FOXI3A8MTJ6 420 aaPredicted RBP12.22□□□□□ -0.45
LIMS1-210ENST00000449684 TRDCB7Z8K6 153 aa12.22□□□□□ -0.45
LIMS1-210ENST00000449684 H7C2Y5 167 aa12.22□□□□□ -0.45
LIMS1-210ENST00000449684 NBR2O15453 112 aa12.22□□□□□ -0.45
LIMS1-210ENST00000449684 GSTP1P09211 210 aaKnown RBP12.22□□□□□ -0.45
LIMS1-210ENST00000449684 SCTP09683 121 aa12.22□□□□□ -0.45
LIMS1-210ENST00000449684 OR5H8P0DN80 308 aa12.22□□□□□ -0.45
LIMS1-210ENST00000449684 SLC6A1P30531 599 aa12.22□□□□□ -0.45
LIMS1-210ENST00000449684 TALDO1P37837 337 aa12.22□□□□□ -0.45
LIMS1-210ENST00000449684 PLGLAQ15195 96 aa12.22□□□□□ -0.45
LIMS1-210ENST00000449684 RPL39P5Q59GN2 51 aa12.22□□□□□ -0.45
LIMS1-210ENST00000449684 PLAC9Q5JTB6 97 aa12.22□□□□□ -0.45
LIMS1-210ENST00000449684 KPRPQ5T749 579 aaPredicted RBP12.22□□□□□ -0.45
LIMS1-210ENST00000449684 OR10R2Q8NGX6 335 aa12.22□□□□□ -0.45
LIMS1-210ENST00000449684 RCC1LQ96I51 464 aaKnown RBP12.22□□□□□ -0.45
LIMS1-210ENST00000449684 ABHD14BQ96IU4 210 aa12.22□□□□□ -0.45
LIMS1-210ENST00000449684 HSPB9Q9BQS6 159 aa12.22□□□□□ -0.45
LIMS1-210ENST00000449684 NECAP2Q9NVZ3 263 aa12.22□□□□□ -0.45
LIMS1-210ENST00000449684 ITGB1BP1O14713 200 aa12.21□□□□□ -0.45
LIMS1-210ENST00000449684 LDLRAD4O15165 306 aa12.21□□□□□ -0.45
LIMS1-210ENST00000449684 DUS4LO95620 317 aaKnown RBP12.21□□□□□ -0.45
LIMS1-210ENST00000449684 RAB6AP20340 208 aa12.21□□□□□ -0.45
LIMS1-210ENST00000449684 MC5RP33032 325 aa12.21□□□□□ -0.45
LIMS1-210ENST00000449684 PLA2G7Q13093 441 aa12.21□□□□□ -0.45
LIMS1-210ENST00000449684 ARFRP1Q13795 201 aa12.21□□□□□ -0.45
LIMS1-210ENST00000449684 LIN54Q6MZP7 749 aa12.21□□□□□ -0.45
LIMS1-210ENST00000449684 FAM131AQ6UXB0 335 aa12.21□□□□□ -0.45
LIMS1-210ENST00000449684 Q6ZPA2 131 aa12.21□□□□□ -0.45
LIMS1-210ENST00000449684 C8orf86Q6ZUL3 223 aa12.21□□□□□ -0.45
LIMS1-210ENST00000449684 ZNF695Q8IW36 515 aa12.21□□□□□ -0.45
LIMS1-210ENST00000449684 C11orf54Q9H0W9 315 aaPredicted RBP12.21□□□□□ -0.45
LIMS1-210ENST00000449684 ATG5Q9H1Y0 275 aa12.21□□□□□ -0.45
LIMS1-210ENST00000449684 RNF150Q9ULK6 438 aa12.21□□□□□ -0.45
LIMS1-210ENST00000449684 STUB1Q9UNE7 303 aa12.21□□□□□ -0.45
LIMS1-210ENST00000449684 SHISA3A0PJX4 238 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 SMIM30A4D0T7 59 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 OR5H14A6NHG9 310 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 BET1O15155 118 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 ELANEP08246 267 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 GNB3P16520 340 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 CNTFRP26992 372 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 SERPINB10P48595 397 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 RAB25P57735 213 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 FOXE3Q13461 319 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 KIR2DS1Q14954 304 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 ARL6IP1Q15041 203 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 C5orf64Q2M2E5 130 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 TMEM65Q6PI78 240 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 ZNF773Q6PK81 442 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 GLDNQ6ZMI3 551 aaPredicted RBP12.2□□□□□ -0.46
LIMS1-210ENST00000449684 OR4A4PQ8NGN8 299 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 DPF1Q92782 380 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 GPR61Q9BZJ8 451 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 PARP12Q9H0J9 701 aaKnown RBP12.2□□□□□ -0.46
LIMS1-210ENST00000449684 PARP11Q9NR21 331 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 TXNL4BQ9NX01 149 aaKnown RBP12.2□□□□□ -0.46
LIMS1-210ENST00000449684 RDH8Q9NYR8 311 aa12.2□□□□□ -0.46
LIMS1-210ENST00000449684 A0A0B4J203 849 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 NOTOA8MTQ0 251 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 FABP7O15540 132 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 RPLP1P05386 114 aaKnown RBP12.19□□□□□ -0.46
LIMS1-210ENST00000449684 CT45A6P0DMU7 189 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 CT45A5P0DMU8 189 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 CT45A7P0DMV0 189 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 HIST1H1DP16402 221 aaKnown RBP12.19□□□□□ -0.46
LIMS1-210ENST00000449684 FGF9P31371 208 aaPredicted RBP12.19□□□□□ -0.46
LIMS1-210ENST00000449684 MYCNOSP40205 109 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 THBS3P49746 956 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 MOGAT2Q3SYC2 334 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 FOXB2Q5VYV0 432 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 C18orf65Q6ZTR6 163 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 MRPL41Q8IXM3 137 aaKnown RBP12.19□□□□□ -0.46
LIMS1-210ENST00000449684 NPBQ8NG41 125 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 OR10J5Q8NHC4 309 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 MRAPQ8TCY5 172 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 ABHD5Q8WTS1 349 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 RITA1Q96K30 269 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 KCTD7Q96MP8 289 aa12.19□□□□□ -0.46
LIMS1-210ENST00000449684 CHCHD6Q9BRQ6 235 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms