RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 PXMP4Q9Y6I8 212 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 GAPDHP04406 335 aaKnown RBP7.85□□□□□ -1.15
NIPBL-202ENST00000448238 PRF1P14222 555 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 FAM53BQ14153 422 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 ECSCRQ19T08 205 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 ZNF585BQ52M93 769 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 TDHQ8IZJ6 230 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 FRRS1LQ9P0K9 344 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 TINAGQ9UJW2 476 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 KIAA1217Q5T5P2 1943 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 TRGV5A0A0B4J1U4 118 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 NKAIN4Q8IVV8 208 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 GGACTQ9BVM4 153 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 KLF12Q9Y4X4 402 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 CHD1O14646 1710 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 LINC00614P0C842 121 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 INAFM2P0DMQ5 153 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 SPSB4Q96A44 273 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 OR51B2Q9Y5P1 312 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 DISP1Q96F81 1524 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 ZCCHC11Q5TAX3 1644 aaKnown RBP7.85□□□□□ -1.15
NIPBL-202ENST00000448238 NDUFB4O95168 129 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 CD68P34810 354 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-202ENST00000448238 PITX1P78337 314 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-202ENST00000448238 DTX1Q86Y01 620 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 OR10W1Q8NGF6 305 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 NEU3Q9UQ49 428 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 H3BMM0 161 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 RNASEH2CQ8TDP1 164 aaKnown RBP7.85□□□□□ -1.15
NIPBL-202ENST00000448238 BCL2L10Q9HD36 194 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 AKAP12Q02952 1782 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 IGHV3OR16-12A0A075B7B8 117 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 CD5LO43866 347 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 PMS2CLQ68D20 193 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 DAPP1Q9UN19 280 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 GBF1Q92538 1859 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 SPG11Q96JI7 2443 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 HMGN4O00479 90 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 MPLP40238 635 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 LCN2P80188 198 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 FAM89BQ8N5H3 189 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 MBD1Q9UIS9 605 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-202ENST00000448238 V9GYH0 126 aa7.85□□□□□ -1.15
NIPBL-202ENST00000448238 CD3EP07766 207 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 ALKBH3Q96Q83 286 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-202ENST00000448238 C1orf43Q9BWL3 253 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 MALRD1Q5VYJ5 2156 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 MYO5AQ9Y4I1 1855 aaKnown RBP7.84□□□□□ -1.15
NIPBL-202ENST00000448238 A0A1W2PNR3 127 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 PRR32B1ATL7 298 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 NPIPB4C9JG80 1138 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 IFI27P40305 119 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-202ENST00000448238 GUCA2AQ02747 115 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 MMDQ15546 238 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 A0A087WUJ7 227 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-202ENST00000448238 FFAR1O14842 300 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 PPYP01298 95 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 RCC1P18754 421 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-202ENST00000448238 OCIAD2Q56VL3 154 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 UNQ9370/PRO34162Q6UXP9 181 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 PCGF1Q9BSM1 259 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 NPCDR1Q9BY65 106 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 ISG20L2Q9H9L3 353 aaKnown RBP7.84□□□□□ -1.15
NIPBL-202ENST00000448238 WSB2Q9NYS7 404 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-202ENST00000448238 PGPA6NDG6 321 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 ZNF83P51522 516 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 EWSR1Q01844 656 aaKnown RBP eCLIP7.84□□□□□ -1.15
NIPBL-202ENST00000448238 SRSF12Q8WXF0 261 aaKnown RBP7.84□□□□□ -1.15
NIPBL-202ENST00000448238 OTX1P32242 354 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-202ENST00000448238 P2RY4P51582 365 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 ZNRF1Q8ND25 227 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 OR52E5Q8NH55 327 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 INSM2Q96T92 566 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-202ENST00000448238 TUBA4BQ9H853 241 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 PXDNQ92626 1479 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 ANKRD36CQ5JPF3 1778 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 TRBV23-1A0A0A0MS06 115 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 SYNGR3O43761 229 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 CD8AP01732 235 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 OR51G1Q8NGK1 321 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 UBE2FQ969M7 185 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 PLPPR2Q96GM1 343 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 ABHD17AQ96GS6 310 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 MS4A3Q96HJ5 214 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 MS4A5Q9H3V2 200 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 RNF122Q9H9V4 155 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 ANAPC10Q9UM13 185 aa7.84□□□□□ -1.15
NIPBL-202ENST00000448238 ALG1L2C9J202 215 aa7.84□□□□□ -1.16
NIPBL-202ENST00000448238 K7N7A8 449 aa7.84□□□□□ -1.16
NIPBL-202ENST00000448238 FGF17O60258 216 aa7.84□□□□□ -1.16
NIPBL-202ENST00000448238 GPR183P32249 361 aa7.84□□□□□ -1.16
NIPBL-202ENST00000448238 TMEM155Q4W5P6 130 aa7.84□□□□□ -1.16
NIPBL-202ENST00000448238 RNF167Q9H6Y7 350 aa7.84□□□□□ -1.16
NIPBL-202ENST00000448238 ERG28Q9UKR5 140 aa7.84□□□□□ -1.16
NIPBL-202ENST00000448238 TMEM238C9JI98 176 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 C3orf80F5H4A9 247 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 PLPP1O14494 284 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 ITGB1BP1O14713 200 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 CXCL13O43927 109 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms