RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 PLCH2O75038 1416 aa2.55□□□□□ -2
PMS1-216ENST00000447734 LTAP01374 205 aa2.55□□□□□ -2
PMS1-216ENST00000447734 IFNA1P01562 189 aa2.55□□□□□ -2
PMS1-216ENST00000447734 IFNA21P01568 189 aa2.55□□□□□ -2
PMS1-216ENST00000447734 FGF6P10767 208 aa2.55□□□□□ -2
PMS1-216ENST00000447734 HIST1H1TP22492 207 aaPredicted RBP2.55□□□□□ -2
PMS1-216ENST00000447734 GABRA3P34903 492 aa2.55□□□□□ -2
PMS1-216ENST00000447734 TGFBR1P36897 503 aa2.55□□□□□ -2
PMS1-216ENST00000447734 RPL5P46777 297 aaKnown RBP2.55□□□□□ -2
PMS1-216ENST00000447734 DEFB116Q30KQ4 102 aa2.55□□□□□ -2
PMS1-216ENST00000447734 TEX36Q5VZQ5 186 aa2.55□□□□□ -2
PMS1-216ENST00000447734 LPCAT3Q6P1A2 487 aa2.55□□□□□ -2
PMS1-216ENST00000447734 C3orf33Q6P1S2 294 aa2.55□□□□□ -2
PMS1-216ENST00000447734 Q6ZR54 194 aa2.55□□□□□ -2
PMS1-216ENST00000447734 Q6ZTC4 211 aa2.55□□□□□ -2
PMS1-216ENST00000447734 C20orf196Q8IYI0 205 aa2.55□□□□□ -2
PMS1-216ENST00000447734 KMT2EQ8IZD2 1858 aa2.55□□□□□ -2
PMS1-216ENST00000447734 LY6G5BQ8NDX9 201 aa2.55□□□□□ -2
PMS1-216ENST00000447734 OR9A2Q8NGT5 310 aa2.55□□□□□ -2
PMS1-216ENST00000447734 OR8S1Q8NH09 359 aa2.55□□□□□ -2
PMS1-216ENST00000447734 OR52N1Q8NH53 320 aa2.55□□□□□ -2
PMS1-216ENST00000447734 OR4A5Q8NH83 315 aa2.55□□□□□ -2
PMS1-216ENST00000447734 LHFPL5Q8TAF8 219 aa2.55□□□□□ -2
PMS1-216ENST00000447734 BOLA2Q9H3K6 86 aa2.55□□□□□ -2
PMS1-216ENST00000447734 BATF3Q9NR55 127 aa2.55□□□□□ -2
PMS1-216ENST00000447734 IDI2-AS1Q9NZ38 188 aa2.55□□□□□ -2
PMS1-216ENST00000447734 MRPL27Q9P0M9 148 aaKnown RBP2.55□□□□□ -2
PMS1-216ENST00000447734 ZNF492Q9P255 531 aa2.55□□□□□ -2
PMS1-216ENST00000447734 TDRD6O60522 2096 aaKnown RBP2.54□□□□□ -2
PMS1-216ENST00000447734 GRIN2BQ13224 1484 aa2.54□□□□□ -2
PMS1-216ENST00000447734 TMED7-TICAM2A0A0A6YYA0 188 aa2.54□□□□□ -2
PMS1-216ENST00000447734 INMT-MINDY4F8WBC2 141 aa2.54□□□□□ -2
PMS1-216ENST00000447734 M0R381 172 aa2.54□□□□□ -2
PMS1-216ENST00000447734 OR7C2O60412 319 aa2.54□□□□□ -2
PMS1-216ENST00000447734 ADRA2AP08913 450 aa2.54□□□□□ -2
PMS1-216ENST00000447734 CBR1P16152 277 aa2.54□□□□□ -2
PMS1-216ENST00000447734 CCL1P22362 96 aa2.54□□□□□ -2
PMS1-216ENST00000447734 KRTAP5-9P26371 169 aa2.54□□□□□ -2
PMS1-216ENST00000447734 CA7P43166 264 aa2.54□□□□□ -2
PMS1-216ENST00000447734 LINC00313P59037 77 aa2.54□□□□□ -2
PMS1-216ENST00000447734 RUNX1Q01196 453 aa2.54□□□□□ -2
PMS1-216ENST00000447734 DEFA6Q01524 100 aa2.54□□□□□ -2
PMS1-216ENST00000447734 TNFRSF9Q07011 255 aa2.54□□□□□ -2
PMS1-216ENST00000447734 FABP9Q0Z7S8 132 aa2.54□□□□□ -2
PMS1-216ENST00000447734 MMDQ15546 238 aa2.54□□□□□ -2
PMS1-216ENST00000447734 ZNF79Q15937 498 aa2.54□□□□□ -2
PMS1-216ENST00000447734 IAH1Q2TAA2 248 aaPredicted RBP2.54□□□□□ -2
PMS1-216ENST00000447734 C5orf46Q6UWT4 87 aa2.54□□□□□ -2
PMS1-216ENST00000447734 TIFABQ6ZNK6 161 aa2.54□□□□□ -2
PMS1-216ENST00000447734 ZNF101Q8IZC7 436 aa2.54□□□□□ -2
PMS1-216ENST00000447734 RNF175Q8N4F7 328 aa2.54□□□□□ -2
PMS1-216ENST00000447734 Q8N7P7 452 aa2.54□□□□□ -2
PMS1-216ENST00000447734 CYB561D1Q8N8Q1 229 aa2.54□□□□□ -2
PMS1-216ENST00000447734 OR51A2Q8NGJ7 313 aa2.54□□□□□ -2
PMS1-216ENST00000447734 OR2T27Q8NH04 317 aa2.54□□□□□ -2
PMS1-216ENST00000447734 KCTD4Q8WVF5 259 aa2.54□□□□□ -2
PMS1-216ENST00000447734 ITLN2Q8WWU7 325 aaPredicted RBP2.54□□□□□ -2
PMS1-216ENST00000447734 MAL2Q969L2 176 aa2.54□□□□□ -2
PMS1-216ENST00000447734 ZHX1-C8orf76Q96EF9 292 aa2.54□□□□□ -2
PMS1-216ENST00000447734 L3HYPDHQ96EM0 354 aa2.54□□□□□ -2
PMS1-216ENST00000447734 LINC00477Q96M19 166 aa2.54□□□□□ -2
PMS1-216ENST00000447734 TSSK6Q9BXA6 273 aa2.54□□□□□ -2
PMS1-216ENST00000447734 PLA2G2FQ9BZM2 168 aa2.54□□□□□ -2
PMS1-216ENST00000447734 ALX4Q9H161 411 aaPredicted RBP2.54□□□□□ -2
PMS1-216ENST00000447734 CMTM6Q9NX76 183 aa2.54□□□□□ -2
PMS1-216ENST00000447734 DHCR7Q9UBM7 475 aaKnown RBP2.54□□□□□ -2
PMS1-216ENST00000447734 SMPXQ9UHP9 88 aa2.54□□□□□ -2
PMS1-216ENST00000447734 ANGPT4Q9Y264 503 aa2.54□□□□□ -2
PMS1-216ENST00000447734 LOXHD1Q8IVV2 1947 aa2.54□□□□□ -2
PMS1-216ENST00000447734 WRNQ14191 1432 aaPredicted RBP eCLIP2.53□□□□□ -2
PMS1-216ENST00000447734 TNS2Q63HR2 1409 aa2.53□□□□□ -2
PMS1-216ENST00000447734 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.53□□□□□ -2
PMS1-216ENST00000447734 IGHV3-43A0A0B4J1X8 118 aa2.53□□□□□ -2
PMS1-216ENST00000447734 IZUMO1RA6ND01 250 aa2.53□□□□□ -2
PMS1-216ENST00000447734 OR4C45A6NMZ5 311 aa2.53□□□□□ -2
PMS1-216ENST00000447734 K7ERS5 55 aa2.53□□□□□ -2
PMS1-216ENST00000447734 FAAHO00519 579 aa2.53□□□□□ -2
PMS1-216ENST00000447734 ATG12O94817 140 aa2.53□□□□□ -2
PMS1-216ENST00000447734 CCNE2O96020 404 aa2.53□□□□□ -2
PMS1-216ENST00000447734 MT-CO2P00403 227 aa2.53□□□□□ -2
PMS1-216ENST00000447734 IGLV3-27P01718 113 aa2.53□□□□□ -2
PMS1-216ENST00000447734 OPN1SWP03999 348 aa2.53□□□□□ -2
PMS1-216ENST00000447734 HLA-DQB2P05538 268 aa2.53□□□□□ -2
PMS1-216ENST00000447734 SERPINA7P05543 415 aa2.53□□□□□ -2
PMS1-216ENST00000447734 CRYGDP07320 174 aa2.53□□□□□ -2
PMS1-216ENST00000447734 OR5AC1P0C628 307 aa2.53□□□□□ -2
PMS1-216ENST00000447734 ELK1P19419 428 aa2.53□□□□□ -2
PMS1-216ENST00000447734 CDK2P24941 298 aa2.53□□□□□ -2
PMS1-216ENST00000447734 CD34P28906 385 aa2.53□□□□□ -2
PMS1-216ENST00000447734 OR10J1P30954 320 aa2.53□□□□□ -2
PMS1-216ENST00000447734 PPP1CCP36873 323 aaKnown RBP2.53□□□□□ -2
PMS1-216ENST00000447734 GNG3P63215 75 aa2.53□□□□□ -2
PMS1-216ENST00000447734 TFAMQ00059 246 aaKnown RBP2.53□□□□□ -2
PMS1-216ENST00000447734 PDGFRLQ15198 375 aa2.53□□□□□ -2
PMS1-216ENST00000447734 TSNQ15631 228 aaKnown RBP2.53□□□□□ -2
PMS1-216ENST00000447734 SP6Q3SY56 376 aa2.53□□□□□ -2
PMS1-216ENST00000447734 TMEM144Q7Z5S9 345 aa2.53□□□□□ -2
PMS1-216ENST00000447734 SMIM20Q8N5G0 67 aa2.53□□□□□ -2
PMS1-216ENST00000447734 KRTCAP2Q8N6L1 136 aa2.53□□□□□ -2
PMS1-216ENST00000447734 FER1L6-AS1Q8NA97 138 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms