RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 PPIFP30405 207 aaKnown RBP16.21■□□□□ 0.19
SDC1-205ENST00000447124 RAB11BQ15907 218 aa16.21■□□□□ 0.19
SDC1-205ENST00000447124 NPBQ8NG41 125 aa16.21■□□□□ 0.19
SDC1-205ENST00000447124 AGMATQ9BSE5 352 aa16.21■□□□□ 0.19
SDC1-205ENST00000447124 URM1Q9BTM9 101 aaKnown RBP16.21■□□□□ 0.19
SDC1-205ENST00000447124 KLK15Q9H2R5 256 aa16.21■□□□□ 0.19
SDC1-205ENST00000447124 RIMS4Q9H426 269 aaPredicted RBP16.21■□□□□ 0.19
SDC1-205ENST00000447124 STEAP1Q9UHE8 339 aa16.21■□□□□ 0.19
SDC1-205ENST00000447124 SLC23A1Q9UHI7 598 aa16.21■□□□□ 0.19
SDC1-205ENST00000447124 HSF4Q9ULV5 492 aa16.21■□□□□ 0.19
SDC1-205ENST00000447124 WSB1Q9Y6I7 421 aa16.21■□□□□ 0.19
SDC1-205ENST00000447124 LDLRAD4O15165 306 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 NBR2O15453 112 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 PROP1O75360 226 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 ARL6IP5O75915 188 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 SCTP09683 121 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 VDAC1P21796 283 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 CALRP27797 417 aaKnown RBP16.2■□□□□ 0.18
SDC1-205ENST00000447124 VEGFCP49767 419 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 SSX1Q16384 188 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 C5orf64Q2M2E5 130 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 DEFB121Q5J5C9 76 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 PLAC9Q5JTB6 97 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 GLDNQ6ZMI3 551 aaPredicted RBP16.2■□□□□ 0.18
SDC1-205ENST00000447124 FAM3DQ96BQ1 224 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 ARHGAP5-AS1Q96IT6 56 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 ABHD14BQ96IU4 210 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 MCRIP2Q9BUT9 160 aaKnown RBP16.2■□□□□ 0.18
SDC1-205ENST00000447124 PECRQ9BY49 303 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 C11orf54Q9H0W9 315 aaPredicted RBP16.2■□□□□ 0.18
SDC1-205ENST00000447124 OR51J1Q9H342 316 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 Q9N2K0 584 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 PIPOXQ9P0Z9 390 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 OR1A1Q9P1Q5 309 aa16.2■□□□□ 0.18
SDC1-205ENST00000447124 SHISA3A0PJX4 238 aa16.19■□□□□ 0.18
SDC1-205ENST00000447124 ITGB1BP1O14713 200 aa16.19■□□□□ 0.18
SDC1-205ENST00000447124 RAB29O14966 203 aa16.19■□□□□ 0.18
SDC1-205ENST00000447124 NDUFA3O95167 84 aa16.19■□□□□ 0.18
SDC1-205ENST00000447124 HLA-DRB1P01911 266 aa16.19■□□□□ 0.18
SDC1-205ENST00000447124 PSMA1P25786 263 aaKnown RBP16.19■□□□□ 0.18
SDC1-205ENST00000447124 CEACAM6P40199 344 aa16.19■□□□□ 0.18
SDC1-205ENST00000447124 LIN54Q6MZP7 749 aa16.19■□□□□ 0.18
SDC1-205ENST00000447124 FAM71F2Q6NXP2 309 aa16.19■□□□□ 0.18
SDC1-205ENST00000447124 IZUMO2Q6UXV1 221 aa16.19■□□□□ 0.18
SDC1-205ENST00000447124 MOB1BQ7L9L4 216 aa16.19■□□□□ 0.18
SDC1-205ENST00000447124 MYOZ3Q8TDC0 251 aa16.19■□□□□ 0.18
SDC1-205ENST00000447124 V9GY05 133 aa16.19■□□□□ 0.18
SDC1-205ENST00000447124 IGKV1-6A0A0C4DH72 117 aa16.18■□□□□ 0.18
SDC1-205ENST00000447124 ATP6V0E1O15342 81 aa16.18■□□□□ 0.18
SDC1-205ENST00000447124 SNRPBP14678 240 aaKnown RBP16.18■□□□□ 0.18
SDC1-205ENST00000447124 RAB25P57735 213 aa16.18■□□□□ 0.18
SDC1-205ENST00000447124 HLA-DRB3P79483 266 aa16.18■□□□□ 0.18
SDC1-205ENST00000447124 FAM131AQ6UXB0 335 aa16.18■□□□□ 0.18
SDC1-205ENST00000447124 CNBD2Q96M20 576 aa16.18■□□□□ 0.18
SDC1-205ENST00000447124 CHCHD6Q9BRQ6 235 aa16.18■□□□□ 0.18
SDC1-205ENST00000447124 GPR61Q9BZJ8 451 aa16.18■□□□□ 0.18
SDC1-205ENST00000447124 ACOT13Q9NPJ3 140 aa16.18■□□□□ 0.18
SDC1-205ENST00000447124 RNF150Q9ULK6 438 aa16.18■□□□□ 0.18
SDC1-205ENST00000447124 TMEM272A0A1B0GTI8 110 aa16.17■□□□□ 0.18
SDC1-205ENST00000447124 FCN1O00602 326 aa16.17■□□□□ 0.18
SDC1-205ENST00000447124 LINC00205P59089 165 aa16.17■□□□□ 0.18
SDC1-205ENST00000447124 HES5Q5TA89 166 aa16.17■□□□□ 0.18
SDC1-205ENST00000447124 OR8U1Q8NH10 309 aa16.17■□□□□ 0.18
SDC1-205ENST00000447124 FBXL15Q9H469 300 aa16.17■□□□□ 0.18
SDC1-205ENST00000447124 KCNK7Q9Y2U2 307 aa16.17■□□□□ 0.18
SDC1-205ENST00000447124 FBXO7Q9Y3I1 522 aa16.17■□□□□ 0.18
SDC1-205ENST00000447124 H0YJW9 148 aa16.16■□□□□ 0.18
SDC1-205ENST00000447124 IGLV1-40P01703 118 aa16.16■□□□□ 0.18
SDC1-205ENST00000447124 OR5H8P0DN80 308 aa16.16■□□□□ 0.18
SDC1-205ENST00000447124 NDPQ00604 133 aa16.16■□□□□ 0.18
SDC1-205ENST00000447124 TBCEQ15813 527 aaPredicted RBP16.16■□□□□ 0.18
SDC1-205ENST00000447124 ZNF491Q8N8L2 437 aa16.16■□□□□ 0.18
SDC1-205ENST00000447124 OR5AN1Q8NGI8 311 aa16.16■□□□□ 0.18
SDC1-205ENST00000447124 C4orf3Q8WVX3 66 aa16.16■□□□□ 0.18
SDC1-205ENST00000447124 DPF1Q92782 380 aa16.16■□□□□ 0.18
SDC1-205ENST00000447124 PTX4Q96A99 478 aa16.16■□□□□ 0.18
SDC1-205ENST00000447124 CMSS1Q9BQ75 279 aaKnown RBP16.16■□□□□ 0.18
SDC1-205ENST00000447124 GNB4Q9HAV0 340 aa16.16■□□□□ 0.18
SDC1-205ENST00000447124 PARP11Q9NR21 331 aa16.16■□□□□ 0.18
SDC1-205ENST00000447124 TRAV41A0A0B4J266 112 aa16.15■□□□□ 0.18
SDC1-205ENST00000447124 DENRO43583 198 aaKnown RBP16.15■□□□□ 0.18
SDC1-205ENST00000447124 EGR2P11161 476 aaPredicted RBP16.15■□□□□ 0.18
SDC1-205ENST00000447124 ZBTB25P24278 435 aa16.15■□□□□ 0.18
SDC1-205ENST00000447124 OR10A3P58181 314 aa16.15■□□□□ 0.18
SDC1-205ENST00000447124 MOGAT2Q3SYC2 334 aa16.15■□□□□ 0.18
SDC1-205ENST00000447124 C19orf54Q5BKX5 351 aa16.15■□□□□ 0.18
SDC1-205ENST00000447124 ZNF367Q7RTV3 350 aa16.15■□□□□ 0.18
SDC1-205ENST00000447124 MINDY2Q8NBR6 621 aa16.15■□□□□ 0.18
SDC1-205ENST00000447124 OR56B1Q8NGI3 324 aa16.15■□□□□ 0.18
SDC1-205ENST00000447124 VCX3BQ9H321 246 aa16.15■□□□□ 0.18
SDC1-205ENST00000447124 RAB22AQ9UL26 194 aa16.15■□□□□ 0.18
SDC1-205ENST00000447124 COL7A1Q02388 2944 aa16.15■□□□□ 0.18
SDC1-205ENST00000447124 TRDCB7Z8K6 153 aa16.14■□□□□ 0.17
SDC1-205ENST00000447124 I3L521 148 aa16.14■□□□□ 0.17
SDC1-205ENST00000447124 RRHO14718 337 aa16.14■□□□□ 0.17
SDC1-205ENST00000447124 RAB9AP51151 201 aa16.14■□□□□ 0.17
SDC1-205ENST00000447124 PSMD7P51665 324 aa16.14■□□□□ 0.17
SDC1-205ENST00000447124 LUMP51884 338 aaPredicted RBP16.14■□□□□ 0.17
SDC1-205ENST00000447124 CX3CL1P78423 397 aa16.14■□□□□ 0.17
SDC1-205ENST00000447124 FHL3Q13643 280 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms