RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 FAM222AQ5U5X8 452 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 SPATA31B1PQ5VZV4 182 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 MORN3Q6PF18 240 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 RASSF6Q6ZTQ3 369 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 FAM19A3Q7Z5A8 133 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZDHHC22Q8N966 263 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 OR2Z1Q8NG97 314 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 OR5B17Q8NGF7 314 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 OR10D3Q8NH80 312 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 PPP1R36Q96LQ0 422 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 DERL3Q96Q80 235 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 TBL1YQ9BQ87 522 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 RTBDNQ9BSG5 229 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNF355PQ9NSJ1 428 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 PARVAQ9NVD7 372 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 TAC3Q9UHF0 121 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 ENOPH1Q9UHY7 261 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 GLS2Q9UI32 602 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNF337Q9Y3M9 751 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 AKAP12Q02952 1782 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 NACAE9PAV3 2078 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 EPG5Q9HCE0 2579 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 SBF1O95248 1867 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 ROCK1Q13464 1354 aa2.86□□□□□ -1.95
HMGB1P48-201ENST00000446155 USP54Q70EL1 1684 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 WDR87Q6ZQQ6 2873 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 BAHCC1Q9P281 2608 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 SLIT3O75094 1523 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 KIF13BQ9NQT8 1826 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 BTNL10A8MVZ5 291 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 A8MWL6 223 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 TMEM250H0YL14 139 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 M0QYV0 167 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 KCNK2O95069 426 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 HLA-DQB1P01920 261 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 C1GALT1C1LP0DN25 315 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 CXCL3P19876 107 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 SLC6A1P30531 599 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 HSPA13P48723 471 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 IDH3GP51553 393 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 H2BFSP57053 126 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 RAB2AP61019 212 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 CXCR4P61073 352 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 RANP62826 216 aaKnown RBP2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 DEFB116Q30KQ4 102 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 LUZP6Q538Z0 58 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 TTMPQ5BVD1 217 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 C1orf195Q5TG92 126 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZFP1Q6P2D0 407 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 SCGB1D4Q6XE38 83 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 VN1R4Q7Z5H5 301 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 GID4Q8IVV7 300 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNF433Q8N7K0 673 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 OR2M3Q8NG83 312 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 OR1P1Q8NH06 330 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 OR5K1Q8NHB7 308 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 TNFAIP8L1Q8WVP5 186 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 RBMXL1Q96E39 390 aaKnown RBP2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 NDFIP1Q9BT67 221 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 XPNPEP1Q9NQW7 623 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 UBQLN4Q9NRR5 601 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 C21orf62Q9NYP8 219 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 TMEM216Q9P0N5 145 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 RPS6KB2Q9UBS0 482 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 MUC6Q6W4X9 2439 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 LY75O60449 1722 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 KNDC1Q76NI1 1749 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 IFT172Q9UG01 1749 aa2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 SETXQ7Z333 2677 aaKnown RBP2.85□□□□□ -1.95
HMGB1P48-201ENST00000446155 CHD6Q8TD26 2715 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 ARFGEF1Q9Y6D6 1849 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 TEX50A0A1B0GTY4 177 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 RGS5O15539 181 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 KRT75O95678 551 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 CXorf1O96002 111 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 TNNC2P02585 160 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 IL6P05231 212 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 IL3P08700 152 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 MYL12AP19105 171 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 CXCL2P19875 107 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 OPRK1P41145 380 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 SULT1A2P50226 295 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 DAD1P61803 113 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 SLC35A2P78381 396 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 GLO1Q04760 184 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 SRSF6Q13247 344 aaKnown RBP2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 TMED2Q15363 201 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 LRRC75BQ2VPJ9 315 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNF658BQ4V348 819 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 HENMT1Q5T8I9 393 aaKnown RBP2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 TMEM215Q68D42 235 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 ELP2Q6IA86 826 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 LINC01551Q86U37 167 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 CYB561D1Q8N8Q1 229 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 OR2K2Q8NGT1 345 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 LINC01560Q8TB33 94 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 TMBIM1Q969X1 311 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 DGCR14Q96DF8 476 aaKnown RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms