RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 NIT2Q9NQR4 276 aa10.61□□□□□ -0.71
TRO-215ENST00000445561 CHD3Q12873 2000 aaKnown RBP10.6□□□□□ -0.71
TRO-215ENST00000445561 CLDN1O95832 211 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 CD55P08174 381 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 WNT2P09544 360 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 RPL30P62888 115 aaKnown RBP10.6□□□□□ -0.71
TRO-215ENST00000445561 HBG1P69891 147 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 HBG2P69892 147 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 KIAA0141Q14154 515 aaPredicted RBP10.6□□□□□ -0.71
TRO-215ENST00000445561 LRRC75BQ2VPJ9 315 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 PLA2G2CQ5R387 149 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 TPRX1Q8N7U7 411 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 CNEP1R1Q8N9A8 125 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 KLF14Q8TD94 323 aaPredicted RBP10.6□□□□□ -0.71
TRO-215ENST00000445561 TRIB1Q96RU8 372 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 C12orf77C9JDV5 145 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 MLNRO43193 412 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 YIF1AO95070 293 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 BCL2P10415 239 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 RAC2P15153 192 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 CD200P41217 278 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 LINC00205P59089 165 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 B2MP61769 119 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 RPS16P62249 146 aaKnown RBP10.6□□□□□ -0.71
TRO-215ENST00000445561 TGFBR3Q03167 851 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 SRSF6Q13247 344 aaKnown RBP10.6□□□□□ -0.71
TRO-215ENST00000445561 ZNF674Q2M3X9 581 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 FAM90A2PQ658T7 463 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 BTNL3Q6UXE8 466 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 Q6ZR03 302 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 BEND4Q6ZU67 534 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 WDR61Q9GZS3 305 aaKnown RBP10.6□□□□□ -0.71
TRO-215ENST00000445561 HIPK2Q9H2X6 1198 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 UFSP2Q9NUQ7 469 aa10.6□□□□□ -0.71
TRO-215ENST00000445561 PCNX2A6NKB5 2137 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 A0A087WWC5 75 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 TRAV1-1A0A0B4J248 108 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 PIGBOS1A0A0B4J2F0 54 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 IQCF6A8MYZ5 107 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 HMGB3O15347 200 aaKnown RBP10.59□□□□□ -0.71
TRO-215ENST00000445561 PRAMEF6Q5VXH4 476 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 C1QL4Q86Z23 238 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 GALMQ96C23 342 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 RBKSQ9H477 322 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 DMXL1Q9Y485 3027 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 IL2RGP31785 369 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 SOX8P57073 446 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 SLC38A11Q08AI6 406 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 SLC35E3Q7Z769 313 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 ZNF645Q8N7E2 425 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 TMEM178AQ8NBL3 297 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 MRGPRDQ8TDS7 321 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 KCNIP1Q9NZI2 227 aa10.59□□□□□ -0.71
TRO-215ENST00000445561 DOCK11Q5JSL3 2073 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 CYB5BO43169 146 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 IGKV1D-33P01593 117 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 IGKV1-33P01594 117 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 HBZP02008 142 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 GABRA2P47869 451 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 GLIPR1P48060 266 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 S100A12P80511 92 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 TNFRSF9Q07011 255 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 GABRA6Q16445 453 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 C11orf53Q8IXP5 236 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 CISD1Q9NZ45 108 aaKnown RBP10.58□□□□□ -0.72
TRO-215ENST00000445561 CLN8Q9UBY8 286 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 SMG1Q96Q15 3661 aaKnown RBP10.58□□□□□ -0.72
TRO-215ENST00000445561 IGHV3-43A0A0B4J1X8 118 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 TMEM30CPA0ZSE6 113 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 LINC00587B1AMM8 73 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 J3QW42 95 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 M0R296 226 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 PPIHO43447 177 aaKnown RBP10.58□□□□□ -0.72
TRO-215ENST00000445561 S1PR2O95136 353 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 FABP1P07148 127 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 IGHV3-43DP0DP04 118 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 SSTR5P35346 364 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 TNFSF10P50591 281 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 SPINK9Q5DT21 86 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 TCTEX1D2Q8WW35 142 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 TAF15Q92804 592 aaKnown RBP eCLIP10.58□□□□□ -0.72
TRO-215ENST00000445561 ZDHHC16Q969W1 377 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 PSMG3Q9BT73 122 aaPredicted RBP10.58□□□□□ -0.72
TRO-215ENST00000445561 MSL2Q9HCI7 577 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 METRNQ9UJH8 293 aa10.58□□□□□ -0.72
TRO-215ENST00000445561 CEBPZOSA8MTT3 80 aa10.57□□□□□ -0.72
TRO-215ENST00000445561 C17orf98A8MV24 154 aa10.57□□□□□ -0.72
TRO-215ENST00000445561 EIF2S3P41091 472 aaKnown RBP10.57□□□□□ -0.72
TRO-215ENST00000445561 NDUFA6P56556 154 aa10.57□□□□□ -0.72
TRO-215ENST00000445561 BRWD1-AS2P59051 145 aa10.57□□□□□ -0.72
TRO-215ENST00000445561 TMEM41BQ5BJD5 291 aa10.57□□□□□ -0.72
TRO-215ENST00000445561 VWA1Q6PCB0 445 aa10.57□□□□□ -0.72
TRO-215ENST00000445561 FAM214BQ7L5A3 538 aa10.57□□□□□ -0.72
TRO-215ENST00000445561 RFESDQ8TAC1 157 aa10.57□□□□□ -0.72
TRO-215ENST00000445561 CA5BP1Q8WTZ4 195 aa10.57□□□□□ -0.72
TRO-215ENST00000445561 MBD3L1Q8WWY6 194 aa10.57□□□□□ -0.72
TRO-215ENST00000445561 COQ2Q96H96 371 aa10.57□□□□□ -0.72
TRO-215ENST00000445561 ZNF251Q9BRH9 671 aa10.57□□□□□ -0.72
TRO-215ENST00000445561 HES4Q9HCC6 221 aa10.57□□□□□ -0.72
TRO-215ENST00000445561 GSN-AS1Q9NRJ2 163 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms