RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 TIMM23O14925 209 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 RAB13P51153 203 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 ACTBP60709 375 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 MRPS10P82664 201 aaKnown RBP11.36□□□□□ -0.59
SSBP3-208ENST00000444533 FOXL1Q12952 345 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 IL18Q14116 193 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 KRTAP24-1Q3LI83 254 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 ARSJQ5FYB0 599 aaPredicted RBP11.36□□□□□ -0.59
SSBP3-208ENST00000444533 LDLRAD2Q5SZI1 272 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 UTF1Q5T230 341 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 C5orf24Q7Z6I8 188 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 THNSL2Q86YJ6 484 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 LAX1Q8IWV1 398 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 DRAM1Q8N682 238 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 GVQW1Q8N7I0 195 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 OR4F5Q8NH21 305 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 OR56B4Q8NH76 319 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 FCAMRQ8WWV6 532 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 SLIRPQ9GZT3 109 aaKnown RBP11.36□□□□□ -0.59
SSBP3-208ENST00000444533 C11orf54Q9H0W9 315 aaPredicted RBP11.36□□□□□ -0.59
SSBP3-208ENST00000444533 A3GALT2U3KPV4 340 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 SAA2-SAA4A0A096LPE2 208 aa11.35□□□□□ -0.59
SSBP3-208ENST00000444533 IGKV1-6A0A0C4DH72 117 aa11.35□□□□□ -0.59
SSBP3-208ENST00000444533 M0QZK8 103 aa11.35□□□□□ -0.59
SSBP3-208ENST00000444533 RBBP9O75884 186 aa11.35□□□□□ -0.59
SSBP3-208ENST00000444533 SLC22A5O76082 557 aa11.35□□□□□ -0.59
SSBP3-208ENST00000444533 HLA-DQB1P01920 261 aa11.35□□□□□ -0.59
SSBP3-208ENST00000444533 OR8U9P0C7N5 309 aa11.35□□□□□ -0.59
SSBP3-208ENST00000444533 SAA2P0DJI9 122 aaPredicted RBP11.35□□□□□ -0.59
SSBP3-208ENST00000444533 PTHLHP12272 177 aa11.35□□□□□ -0.59
SSBP3-208ENST00000444533 RCVRNP35243 200 aa11.35□□□□□ -0.59
SSBP3-208ENST00000444533 LUMP51884 338 aaPredicted RBP11.35□□□□□ -0.59
SSBP3-208ENST00000444533 CBX3Q13185 183 aa11.35□□□□□ -0.59
SSBP3-208ENST00000444533 HERPUD1Q15011 391 aa11.35□□□□□ -0.59
SSBP3-208ENST00000444533 PYHIN1Q6K0P9 492 aa11.35□□□□□ -0.59
SSBP3-208ENST00000444533 FAM53AQ6NSI3 398 aaPredicted RBP11.35□□□□□ -0.59
SSBP3-208ENST00000444533 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.35□□□□□ -0.59
SSBP3-208ENST00000444533 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.35□□□□□ -0.59
SSBP3-208ENST00000444533 OR5AP2Q8NGF4 316 aa11.35□□□□□ -0.59
SSBP3-208ENST00000444533 OR4C13Q8NGP0 309 aa11.35□□□□□ -0.59
SSBP3-208ENST00000444533 OR5H2Q8NGV7 314 aa11.35□□□□□ -0.59
SSBP3-208ENST00000444533 OR8U1Q8NH10 309 aa11.35□□□□□ -0.59
SSBP3-208ENST00000444533 A0A1B0GUS0 222 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 A0A1W2PPI3 338 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 DPPA5A6NC42 116 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 FCER2P06734 321 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 SNRNP70P08621 437 aaKnown RBP11.34□□□□□ -0.59
SSBP3-208ENST00000444533 OR5H8P0DN80 308 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 HKR1P10072 659 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 TMEM11P17152 192 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 CD1BP29016 333 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 CDK10Q15131 360 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 ACTBL2Q562R1 376 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 TMEM219Q86XT9 240 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 H1FOOQ8IZA3 346 aaPredicted RBP11.34□□□□□ -0.59
SSBP3-208ENST00000444533 OR2T10Q8NGZ9 312 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 ST6GALNAC6Q969X2 333 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 ABHD14BQ96IU4 210 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 TOLLIPQ9H0E2 274 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 OR2D2Q9H210 308 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 IFI27L2Q9H2X8 130 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 BEX1Q9HBH7 125 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 EHFQ9NZC4 300 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 RNF150Q9ULK6 438 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 OR2W1Q9Y3N9 320 aa11.34□□□□□ -0.59
SSBP3-208ENST00000444533 IGKV1D-8A0A087WSZ0 117 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 A6NDX4 124 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 FABP12A6NFH5 140 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 IGKV1D-33P01593 117 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 IGKV1-33P01594 117 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 APOA2P02652 100 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 NFYAP23511 347 aaPredicted RBP11.33□□□□□ -0.6
SSBP3-208ENST00000444533 CD24P25063 80 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 MC5RP33032 325 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 RAG2P55895 527 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 HERV-K104P61576 105 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 TSPAN5P62079 268 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 DIAPH2-AS1Q14236 149 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 FAM131AQ6UXB0 335 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 C12orf54Q6X4T0 127 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 ZNF833PQ6ZTB9 187 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 PIFOQ8TCI5 191 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 GPX8Q8TED1 209 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 BORCS5Q969J3 196 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 SLC25A33Q9BSK2 321 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 NXF2Q9GZY0 626 aaKnown RBP11.33□□□□□ -0.6
SSBP3-208ENST00000444533 MIXL1Q9H2W2 232 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 RANBP3Q9H6Z4 567 aaPredicted RBP11.33□□□□□ -0.6
SSBP3-208ENST00000444533 C1RLQ9NZP8 487 aa11.33□□□□□ -0.6
SSBP3-208ENST00000444533 IGHV3-72A0A0B4J1Y9 119 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 OR5H14A6NHG9 310 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 GABARAPH6UMI1 98 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 H7C2Y5 167 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 M0R1X1 148 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 PEX14O75381 377 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 OR2F2O95006 317 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 NDUFA7O95182 113 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 MOSP00540 346 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 IFNA6P05013 189 aa11.32□□□□□ -0.6
SSBP3-208ENST00000444533 FCGR2CP31995 323 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms