RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 LINC00482Q8N8I6 264 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 TSPAN14Q8NG11 270 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 CHPT1Q8WUD6 406 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 KCTD7Q96MP8 289 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 DUX3Q96PT4 197 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 NABP2Q9BQ15 211 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 ZNF251Q9BRH9 671 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 LIN7CQ9NUP9 197 aaKnown RBP8.54□□□□□ -1.04
SF3A1-203ENST00000444440 TMEM272A0A1B0GTI8 110 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 NOTOA8MTQ0 251 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 LDLRAD4O15165 306 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 ST8SIA5O15466 376 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 YPEL1O60688 119 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 RPLP1P05386 114 aaKnown RBP8.53□□□□□ -1.04
SF3A1-203ENST00000444440 SLC2A2P11168 524 aaPredicted RBP8.53□□□□□ -1.04
SF3A1-203ENST00000444440 CD36P16671 472 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 THBS3P49746 956 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 CFHR3Q02985 330 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 ARL6IP1Q15041 203 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 MOGAT2Q3SYC2 334 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 TIMM50Q3ZCQ8 353 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 PLAC9Q5JTB6 97 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 LY6G6FQ5SQ64 297 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 NR2C2APQ86WQ0 139 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 MRPL41Q8IXM3 137 aaKnown RBP8.53□□□□□ -1.04
SF3A1-203ENST00000444440 SETD6Q8TBK2 473 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 IL1F10Q8WWZ1 152 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 PTX4Q96A99 478 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 ARHGAP5-AS1Q96IT6 56 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 YPEL2Q96QA6 119 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 CHCHD6Q9BRQ6 235 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 OR1A1Q9P1Q5 309 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 KCNK7Q9Y2U2 307 aa8.53□□□□□ -1.04
SF3A1-203ENST00000444440 TRBV6-6A0A0A6YYG2 114 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 A0A0B4J203 849 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 IGKV1-6A0A0C4DH72 117 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 LOC100506127A0A0U1RQW1 187 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 TXNL1O43396 289 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 PROP1O75360 226 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 CD3GP09693 182 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 LINC00205P59089 165 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 DEFB136Q30KP8 78 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 RPL39P5Q59GN2 51 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 GLDNQ6ZMI3 551 aaPredicted RBP8.52□□□□□ -1.05
SF3A1-203ENST00000444440 FOXRED2Q8IWF2 684 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 KLHL30-AS1Q8NEE0 82 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 RAB3CQ96E17 227 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 ABHD14BQ96IU4 210 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 CMSS1Q9BQ75 279 aaKnown RBP8.52□□□□□ -1.05
SF3A1-203ENST00000444440 PECRQ9BY49 303 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 OR51E2Q9H255 320 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 NECAP2Q9NVZ3 263 aa8.52□□□□□ -1.05
SF3A1-203ENST00000444440 ZNF107Q9UII5 783 aaPredicted RBP8.52□□□□□ -1.05
SF3A1-203ENST00000444440 SMIM30A4D0T7 59 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 K7EIL1 84 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 AP4M1O00189 453 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 SCGNO76038 276 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 SCTP09683 121 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 HOXD3P31249 432 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-203ENST00000444440 SDC2P34741 201 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 ACTBP60709 375 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 HLA-DRB3P79483 266 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 NDPQ00604 133 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 MMDQ15546 238 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 FAM131AQ6UXB0 335 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 OR10R2Q8NGX6 335 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 MRAPQ8TCY5 172 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 RAX2Q96IS3 184 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 P2RX4Q99571 388 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 RASL11BQ9BPW5 248 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 AGMATQ9BSE5 352 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 CENPOQ9BU64 300 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 ATG5Q9H1Y0 275 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 GHITMQ9H3K2 345 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 Q9N2K0 584 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 C12orf4Q9NQ89 552 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 FBXO7Q9Y3I1 522 aa8.51□□□□□ -1.05
SF3A1-203ENST00000444440 IGHV7-81A0A0B4J1V7 117 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 WI2-2373I1.2A0A1W2PRP0 233 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 G3V318 75 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 HSPA12AO43301 675 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 TMEM127O75204 238 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 NDUFA3O95167 84 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 CT45A6P0DMU7 189 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 CT45A5P0DMU8 189 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 CT45A7P0DMV0 189 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 SOX6P35712 828 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 TALDO1P37837 337 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 SCAND1P57086 179 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 MXD1Q05195 221 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 KIAA0141Q14154 515 aaPredicted RBP8.5□□□□□ -1.05
SF3A1-203ENST00000444440 PNLIPRP3Q17RR3 467 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 CROCCP3Q8IVE0 287 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 RNF152Q8N8N0 203 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 OR2AK2Q8NG84 335 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 OR8H1Q8NGG4 311 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 C11orf54Q9H0W9 315 aaPredicted RBP8.5□□□□□ -1.05
SF3A1-203ENST00000444440 ZFP57Q9NU63 452 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 SLC23A1Q9UHI7 598 aa8.5□□□□□ -1.05
SF3A1-203ENST00000444440 DAPK2Q9UIK4 370 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms