RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 C11orf54Q9H0W9 315 aaPredicted RBP12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 ZNF702PQ9H963 129 aa12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 OR1A1Q9P1Q5 309 aa12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 ZNF230Q9UIE0 474 aaPredicted RBP12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 SCOCQ9UIL1 159 aa12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 ELF5Q9UKW6 265 aaPredicted RBP12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 SAA2-SAA4A0A096LPE2 208 aa12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 ST8SIA5O15466 376 aa12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 FGF16O43320 207 aa12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 IGKV1D-33P01593 117 aa12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 IGKV1-33P01594 117 aa12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 APOA1P02647 267 aa12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 SAA2P0DJI9 122 aaPredicted RBP12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 ZNF182P17025 639 aaPredicted RBP12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 TMEM11P17152 192 aa12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 HES1Q14469 280 aa12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 MZT2AQ6P582 158 aa12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 CLVS1Q8IUQ0 354 aaPredicted RBP12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 OR2T10Q8NGZ9 312 aa12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 NUDCD2Q8WVJ2 157 aa12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 AUNIPQ9H7T9 357 aa12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 RDH8Q9NYR8 311 aa12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 GAB2Q9UQC2 676 aa12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 MOB4Q9Y3A3 225 aa12.01□□□□□ -0.49
CSNK1E-210ENST00000442216 SSX5O60225 188 aa12□□□□□ -0.49
CSNK1E-210ENST00000442216 CBX5P45973 191 aa12□□□□□ -0.49
CSNK1E-210ENST00000442216 BLCAPP62952 87 aa12□□□□□ -0.49
CSNK1E-210ENST00000442216 LSAMPQ13449 338 aa12□□□□□ -0.49
CSNK1E-210ENST00000442216 IGSF11Q5DX21 431 aa12□□□□□ -0.49
CSNK1E-210ENST00000442216 CNIH2Q6PI25 160 aa12□□□□□ -0.49
CSNK1E-210ENST00000442216 OR8H1Q8NGG4 311 aa12□□□□□ -0.49
CSNK1E-210ENST00000442216 MAFIPQ8WZ33 124 aa12□□□□□ -0.49
CSNK1E-210ENST00000442216 EAF1Q96JC9 268 aaPredicted RBP12□□□□□ -0.49
CSNK1E-210ENST00000442216 ZNF251Q9BRH9 671 aa12□□□□□ -0.49
CSNK1E-210ENST00000442216 ST6GALNAC5Q9BVH7 336 aa12□□□□□ -0.49
CSNK1E-210ENST00000442216 COMMD3Q9UBI1 195 aa12□□□□□ -0.49
CSNK1E-210ENST00000442216 TENM1Q9UKZ4 2725 aa11.99□□□□□ -0.49
CSNK1E-210ENST00000442216 IGKV1D-8A0A087WSZ0 117 aa11.99□□□□□ -0.49
CSNK1E-210ENST00000442216 BET1O15155 118 aa11.99□□□□□ -0.49
CSNK1E-210ENST00000442216 MOSP00540 346 aa11.99□□□□□ -0.49
CSNK1E-210ENST00000442216 SOX6P35712 828 aa11.99□□□□□ -0.49
CSNK1E-210ENST00000442216 OR3A3P47888 321 aa11.99□□□□□ -0.49
CSNK1E-210ENST00000442216 FBLN7Q53RD9 439 aa11.99□□□□□ -0.49
CSNK1E-210ENST00000442216 TMEM69Q5SWH9 247 aa11.99□□□□□ -0.49
CSNK1E-210ENST00000442216 Q8N6K4 173 aa11.99□□□□□ -0.49
CSNK1E-210ENST00000442216 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.99□□□□□ -0.49
CSNK1E-210ENST00000442216 NABP2Q9BQ15 211 aa11.99□□□□□ -0.49
CSNK1E-210ENST00000442216 GINS4Q9BRT9 223 aa11.99□□□□□ -0.49
CSNK1E-210ENST00000442216 PARP12Q9H0J9 701 aaKnown RBP11.99□□□□□ -0.49
CSNK1E-210ENST00000442216 ZNF221Q9UK13 617 aa11.99□□□□□ -0.49
CSNK1E-210ENST00000442216 IGHV3-72A0A0B4J1Y9 119 aa11.98□□□□□ -0.49
CSNK1E-210ENST00000442216 SMIM31A0A1B0GVY4 71 aa11.98□□□□□ -0.49
CSNK1E-210ENST00000442216 HAX1O00165 279 aa11.98□□□□□ -0.49
CSNK1E-210ENST00000442216 NOL3O60936 208 aaKnown RBP11.98□□□□□ -0.49
CSNK1E-210ENST00000442216 AMY1AP04745 511 aa11.98□□□□□ -0.49
CSNK1E-210ENST00000442216 AMY2AP04746 511 aa11.98□□□□□ -0.49
CSNK1E-210ENST00000442216 HOGA1Q86XE5 327 aa11.98□□□□□ -0.49
CSNK1E-210ENST00000442216 H1FOOQ8IZA3 346 aaPredicted RBP11.98□□□□□ -0.49
CSNK1E-210ENST00000442216 ABHD14BQ96IU4 210 aa11.98□□□□□ -0.49
CSNK1E-210ENST00000442216 CITED1Q99966 193 aa11.98□□□□□ -0.49
CSNK1E-210ENST00000442216 MRPL20Q9BYC9 149 aaKnown RBP11.98□□□□□ -0.49
CSNK1E-210ENST00000442216 SERTAD4Q9NUC0 356 aa11.98□□□□□ -0.49
CSNK1E-210ENST00000442216 ANXA10Q9UJ72 324 aa11.98□□□□□ -0.49
CSNK1E-210ENST00000442216 OR5H14A6NHG9 310 aa11.97□□□□□ -0.49
CSNK1E-210ENST00000442216 EIF4EP06730 217 aaKnown RBP11.97□□□□□ -0.49
CSNK1E-210ENST00000442216 MC5RP33032 325 aa11.97□□□□□ -0.49
CSNK1E-210ENST00000442216 GPR12P47775 334 aa11.97□□□□□ -0.49
CSNK1E-210ENST00000442216 TAS2R20P59543 309 aa11.97□□□□□ -0.49
CSNK1E-210ENST00000442216 HNF4GQ14541 408 aa11.97□□□□□ -0.49
CSNK1E-210ENST00000442216 SPCS2Q15005 226 aa11.97□□□□□ -0.49
CSNK1E-210ENST00000442216 ABCA11PQ4W5N1 156 aa11.97□□□□□ -0.49
CSNK1E-210ENST00000442216 C5orf56Q8N8D9 126 aa11.97□□□□□ -0.49
CSNK1E-210ENST00000442216 BEST4Q8NFU0 473 aa11.97□□□□□ -0.49
CSNK1E-210ENST00000442216 SGMS2Q8NHU3 365 aa11.97□□□□□ -0.49
CSNK1E-210ENST00000442216 SIGLEC9Q9Y336 463 aa11.97□□□□□ -0.49
CSNK1E-210ENST00000442216 ZNF736B4DX44 427 aaPredicted RBP11.96□□□□□ -0.49
CSNK1E-210ENST00000442216 TPPPO94811 219 aa11.96□□□□□ -0.49
CSNK1E-210ENST00000442216 CT45A6P0DMU7 189 aa11.96□□□□□ -0.49
CSNK1E-210ENST00000442216 CT45A5P0DMU8 189 aa11.96□□□□□ -0.49
CSNK1E-210ENST00000442216 CT45A7P0DMV0 189 aa11.96□□□□□ -0.49
CSNK1E-210ENST00000442216 ELK1P19419 428 aa11.96□□□□□ -0.49
CSNK1E-210ENST00000442216 VDAC2P45880 294 aaPredicted RBP11.96□□□□□ -0.49
CSNK1E-210ENST00000442216 RPL39P5Q59GN2 51 aa11.96□□□□□ -0.49
CSNK1E-210ENST00000442216 ARSJQ5FYB0 599 aaPredicted RBP11.96□□□□□ -0.49
CSNK1E-210ENST00000442216 Q6ZS46 218 aa11.96□□□□□ -0.49
CSNK1E-210ENST00000442216 OR5AN1Q8NGI8 311 aa11.96□□□□□ -0.49
CSNK1E-210ENST00000442216 WNT10AQ9GZT5 417 aa11.96□□□□□ -0.49
CSNK1E-210ENST00000442216 PLSCR3Q9NRY6 295 aa11.96□□□□□ -0.49
CSNK1E-210ENST00000442216 LIN7CQ9NUP9 197 aaKnown RBP11.96□□□□□ -0.49
CSNK1E-210ENST00000442216 CCDC59Q9P031 241 aaKnown RBP11.96□□□□□ -0.49
CSNK1E-210ENST00000442216 RNF150Q9ULK6 438 aa11.96□□□□□ -0.49
CSNK1E-210ENST00000442216 TET2Q6N021 2002 aaPredicted RBP11.96□□□□□ -0.5
CSNK1E-210ENST00000442216 HPGDSO60760 199 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 PROP1O75360 226 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 RBBP9O75884 186 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 SLC22A5O76082 557 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 HLA-DQB1P01920 261 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 OR8U9P0C7N5 309 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 PRSS3P35030 304 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 ARPC4P59998 168 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 212.4 ms