RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 CCSO14618 274 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 ARL6IP5O75915 188 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 ABHD16AO95870 558 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 SPARCP09486 303 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 ZNF25P17030 456 aaPredicted RBP5.01□□□□□ -1.61
PTPRR-204ENST00000440835 MPV17P39210 176 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 ERVS71-1P61550 626 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 LCN2P80188 198 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 PAX2Q02962 417 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 MZT1Q08AG7 82 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 KIAA0141Q14154 515 aaPredicted RBP5.01□□□□□ -1.61
PTPRR-204ENST00000440835 PDCD1Q15116 288 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 ALKBH6Q3KRA9 238 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 TP53I3Q53FA7 332 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 PDZD11Q5EBL8 140 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 LINC01590Q5TEZ4 76 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 OR2AJ1Q8NGZ0 328 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 PPP1R35Q8TAP8 253 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 NUDCD2Q8WVJ2 157 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 RAB40AQ8WXH6 277 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 SSBP3Q9BWW4 388 aaPredicted RBP5.01□□□□□ -1.61
PTPRR-204ENST00000440835 SELENOIQ9C0D9 397 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 TUBA4BQ9H853 241 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 FN3KRPQ9HA64 309 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 IGLV1-36A0A0B4J1U3 117 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 TRAV1-2A0A0B4J238 106 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 TRBV2A0A0J9YWF9 115 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 KIR2DS1A0A191URI9 304 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 TVP23AA6NH52 213 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 F8VVB4 439 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 F8VWA3 439 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 AGPAT2O15120 278 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 OGG1O15527 345 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 CDK2P24941 298 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 CD80P33681 288 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 CD200P41217 278 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 PSG7Q13046 419 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 EIF2B1Q14232 305 aaKnown RBP5.01□□□□□ -1.61
PTPRR-204ENST00000440835 ENDOGQ14249 297 aaKnown RBP5.01□□□□□ -1.61
PTPRR-204ENST00000440835 SLC9A3R2Q15599 337 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 ODF4Q2M2E3 257 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 KHDC3LQ587J8 217 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.01□□□□□ -1.61
PTPRR-204ENST00000440835 ZNF101Q8IZC7 436 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 OR8B3Q8NGG8 313 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 OR56B1Q8NGI3 324 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 OR11L1Q8NGX0 322 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 OTOSQ8NHW6 89 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 RNF141Q8WVD5 230 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 SECTM1Q8WVN6 248 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 GHSRQ92847 366 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 APOBEC3DQ96AK3 386 aaPredicted RBP5.01□□□□□ -1.61
PTPRR-204ENST00000440835 FOXRED1Q96CU9 486 aaPredicted RBP5.01□□□□□ -1.61
PTPRR-204ENST00000440835 OR8B2Q96RD0 313 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 IQCF6A8MYZ5 107 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 TRAPPC2LH3BP13 241 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 MAGEB4O15481 346 aaPredicted RBP5.01□□□□□ -1.61
PTPRR-204ENST00000440835 ENSAO43768 121 aaKnown RBP5.01□□□□□ -1.61
PTPRR-204ENST00000440835 CCL2P13500 99 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 ZFP36P26651 326 aaKnown RBP5.01□□□□□ -1.61
PTPRR-204ENST00000440835 OR12D2P58182 307 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 CDK5R1Q15078 307 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 KLF17Q5JT82 389 aaPredicted RBP5.01□□□□□ -1.61
PTPRR-204ENST00000440835 DMKNQ6E0U4 476 aaPredicted RBP5.01□□□□□ -1.61
PTPRR-204ENST00000440835 C1QL4Q86Z23 238 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 OR8G5Q8NG78 346 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 OR5M8Q8NGP6 311 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 NPRL2Q8WTW4 380 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 PPP1R1CQ8WVI7 109 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 ASB13Q8WXK3 278 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 SMIM19Q96E16 107 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 RRNAD1Q96FB5 475 aaKnown RBP5.01□□□□□ -1.61
PTPRR-204ENST00000440835 PACRGQ96M98 296 aaPredicted RBP5.01□□□□□ -1.61
PTPRR-204ENST00000440835 YPEL4Q96NS1 127 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 PCGF1Q9BSM1 259 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 NDUFAF3Q9BU61 184 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 SNHG12Q9BXW3 62 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 CYTL1Q9NRR1 136 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 COA3Q9Y2R0 106 aaPredicted RBP5.01□□□□□ -1.61
PTPRR-204ENST00000440835 ZNF281Q9Y2X9 895 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 GOLT1BQ9Y3E0 138 aa5.01□□□□□ -1.61
PTPRR-204ENST00000440835 MFNGO00587 321 aa5□□□□□ -1.61
PTPRR-204ENST00000440835 TNFRSF13BO14836 293 aaPredicted RBP5□□□□□ -1.61
PTPRR-204ENST00000440835 IFNA17P01571 189 aa5□□□□□ -1.61
PTPRR-204ENST00000440835 FCGR3AP08637 254 aa5□□□□□ -1.61
PTPRR-204ENST00000440835 IRF2P14316 349 aa5□□□□□ -1.61
PTPRR-204ENST00000440835 CTLA4P16410 223 aa5□□□□□ -1.61
PTPRR-204ENST00000440835 ALOX5APP20292 161 aa5□□□□□ -1.61
PTPRR-204ENST00000440835 LPAR6P43657 344 aa5□□□□□ -1.61
PTPRR-204ENST00000440835 TAS2R20P59543 309 aa5□□□□□ -1.61
PTPRR-204ENST00000440835 RPS11P62280 158 aaKnown RBP eCLIP5□□□□□ -1.61
PTPRR-204ENST00000440835 HIST1H3AP68431 136 aa5□□□□□ -1.61
PTPRR-204ENST00000440835 SRSF4Q08170 494 aaKnown RBP5□□□□□ -1.61
PTPRR-204ENST00000440835 SCGB2B2Q4G0G5 96 aa5□□□□□ -1.61
PTPRR-204ENST00000440835 TMEM69Q5SWH9 247 aa5□□□□□ -1.61
PTPRR-204ENST00000440835 HIST2H3PS2Q5TEC6 136 aa5□□□□□ -1.61
PTPRR-204ENST00000440835 ZNF774Q6NX45 483 aa5□□□□□ -1.61
PTPRR-204ENST00000440835 HIST2H3AQ71DI3 136 aa5□□□□□ -1.61
PTPRR-204ENST00000440835 ZNF573Q86YE8 665 aa5□□□□□ -1.61
PTPRR-204ENST00000440835 PNLDC1Q8NA58 520 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms