RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 HBE1P02100 147 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 RPL30P62888 115 aaKnown RBP11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 PSG7Q13046 419 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 FAM90A2PQ658T7 463 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 DEFB123Q8N688 67 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 GTF3AQ92664 365 aaKnown RBP11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 GPR87Q9BY21 358 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 PKIBQ9C010 78 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 RBMXL2O75526 392 aaKnown RBP11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 UBE2NP61088 152 aaKnown RBP11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 OR8G1Q15617 311 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 KHDC3LQ587J8 217 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 LINC00596Q86U02 117 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 CNEP1R1Q8N9A8 125 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 MALSU1Q96EH3 234 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 RBKSQ9H477 322 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 CDH20Q9HBT6 801 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 TMEM9BQ9NQ34 198 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 KLF13Q9Y2Y9 288 aaPredicted RBP11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 TRBV6-6A0A0A6YYG2 114 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 IGKV1D-33P01593 117 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 IGKV1-33P01594 117 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 IGHV3-13P01766 116 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 IGHV3-7P01780 117 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 BCL2P10415 239 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 CHD3Q12873 2000 aaKnown RBP11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 MRGPRDQ8TDS7 321 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 OPA3Q9H6K4 179 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 SH2D1BO14796 132 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 IGHV1-2P23083 117 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 GABRA2P47869 451 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 SRSF6Q13247 344 aaKnown RBP11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 DBX2Q6ZNG2 339 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 NECAP1Q8NC96 275 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 OR8G5Q8NG78 346 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 SNIP1Q8TAD8 396 aaKnown RBP11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 NANOS1Q8WY41 292 aaKnown RBP11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 ZDHHC16Q969W1 377 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 MSL2Q9HCI7 577 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 LIN7CQ9NUP9 197 aaKnown RBP11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 MGAQ8IWI9 3026 aa11.41□□□□□ -0.58
HERPUD1-204ENST00000439977 LRP5LA4QPB2 252 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 HAND1O96004 215 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 CD59P13987 128 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 CD46P15529 392 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 BMP5P22003 454 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 IL2RGP31785 369 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 MDH2P40926 338 aaKnown RBP11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 GLIPR1P48060 266 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 PRAMEF6Q5VXH4 476 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 Q6ZR03 302 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 MDS2Q8NDY4 140 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 EDARADDQ8WWZ3 215 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 C5orf30Q96GV9 206 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 GGACTQ9BVM4 153 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 TOLLIPQ9H0E2 274 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 SLC25A22Q9H936 323 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 TNRC6AQ8NDV7 1962 aaKnown RBP11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 MAP1LC3B2A6NCE7 125 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 C21orf140B9A014 251 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 C12orf77C9JDV5 145 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 HIST1H2BKO60814 126 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 HIST1H2BJP06899 126 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 HIST1H2BOP23527 126 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 HIST1H2BBP33778 126 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 FABP6P51161 128 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 HIST1H2BDP58876 126 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 ERVK11-1P61568 191 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 HIST1H2BCP62807 126 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 HBG1P69891 147 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 HBG2P69892 147 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 SLC38A11Q08AI6 406 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 HIST2H2BEQ16778 126 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 LRRC75BQ2VPJ9 315 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 ZNF766Q5HY98 468 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 RPP25LQ8N5L8 163 aaKnown RBP11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 ZNF610Q8N9Z0 462 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 GATAD1Q8WUU5 269 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 HIST1H2BHQ93079 126 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 LHX4Q969G2 390 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 LSM10Q969L4 123 aaKnown RBP11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 HIST1H2BNQ99877 126 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 HIST1H2BMQ99879 126 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 DCTN5Q9BTE1 182 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 MAP1LC3BQ9GZQ8 125 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 WDR61Q9GZS3 305 aaKnown RBP11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 METRNQ9UJH8 293 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 POLDIP2Q9Y2S7 368 aa11.4□□□□□ -0.58
HERPUD1-204ENST00000439977 PGA5P0DJD9 388 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 SSTR5P35346 364 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 S100A12P80511 92 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 HES3Q5TGS1 186 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 GPR61Q9BZJ8 451 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 C17orf98A8MV24 154 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 CDX4O14627 284 aaPredicted RBP11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 S1PR2O95136 353 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 SLC35E3Q7Z769 313 aa11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 KLF14Q8TD94 323 aaPredicted RBP11.39□□□□□ -0.59
HERPUD1-204ENST00000439977 CA5BP1Q8WTZ4 195 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms