RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 OR5P3Q8WZ94 311 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 OBP2BQ9NPH6 170 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 FBXL17Q9UF56 701 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 POLDIP2Q9Y2S7 368 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 IGKV1D-8A0A087WSZ0 117 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 A0A1B0GU03 582 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 FAM221AA4D161 298 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 MSGN1A6NI15 193 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 RNF212BA8MTL3 300 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 ZNF732B4DXR9 585 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 F8W036 122 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 RNASEK-C17orf49H0YIS7 233 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 H7C2Y5 167 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 J3QT63 122 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 DFFBO76075 338 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 HBE1P02100 147 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 SFTPBP07988 381 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 HOXB5P09067 269 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 OR5AC1P0C628 307 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 ANOS1P23352 680 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 APOBEC3AP31941 199 aaPredicted RBP3.99□□□□□ -1.77
EDEM3-203ENST00000439962 MPV17P39210 176 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 S100A10P60903 97 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 ATXN7L3Q14CW9 347 aaPredicted RBP3.99□□□□□ -1.77
EDEM3-203ENST00000439962 RHEBQ15382 184 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 C3orf36Q3SXR2 165 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 FAM76BQ5HYJ3 339 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 FAM74A1Q5RGS3 127 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 FAM169BQ8N8A8 192 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 ZNF565Q8N9K5 539 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 OR5D18Q8NGL1 313 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 MRPL24Q96A35 216 aaKnown RBP3.99□□□□□ -1.77
EDEM3-203ENST00000439962 BPESC1Q9GZL8 116 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 LYRM2Q9NU23 88 aaPredicted RBP3.99□□□□□ -1.77
EDEM3-203ENST00000439962 UFSP2Q9NUQ7 469 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 DCAF16Q9NXF7 216 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 COA4Q9NYJ1 87 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 TAAR3PQ9P1P4 343 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 NOTCH3Q9UM47 2321 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 TRAV1-1A0A0B4J248 108 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 A0A1B0GWJ7 208 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 MEX3AA1L020 520 aaKnown RBP3.99□□□□□ -1.77
EDEM3-203ENST00000439962 FAM157AC9JC47 383 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 LGALS8O00214 317 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 TSPAN4O14817 238 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 SPRY1O43609 319 aaPredicted RBP3.99□□□□□ -1.77
EDEM3-203ENST00000439962 MED6O75586 246 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 SCO1O75880 301 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 KNG1P01042 644 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 IFNA4P05014 189 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 ATF4P18848 351 aaPredicted RBP3.99□□□□□ -1.77
EDEM3-203ENST00000439962 TAGLN2P37802 199 aaKnown RBP3.99□□□□□ -1.77
EDEM3-203ENST00000439962 SNCAP37840 140 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 RAB2AP61019 212 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 HLA-DRB3P79483 266 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 DEFA5Q01523 94 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 ID3Q02535 119 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 MZT1Q08AG7 82 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 TBC1D28Q2M2D7 210 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 MIDNQ504T8 468 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 SPRNQ5BIV9 151 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 RPL7L1Q6DKI1 246 aaKnown RBP3.99□□□□□ -1.77
EDEM3-203ENST00000439962 OR2T2Q6IF00 324 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 HAGHLQ6PII5 290 aaPredicted RBP3.99□□□□□ -1.77
EDEM3-203ENST00000439962 TRAT1Q6PIZ9 186 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 FIP1L1Q6UN15 594 aaKnown RBP3.99□□□□□ -1.77
EDEM3-203ENST00000439962 CLEC2AQ6UVW9 174 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 FAM219AQ8IW50 185 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 SLC25A40Q8TBP6 338 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 NPRL2Q8WTW4 380 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 PCNPQ8WW12 178 aaKnown RBP3.99□□□□□ -1.77
EDEM3-203ENST00000439962 PIGCQ92535 297 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 KIRREL1Q96J84 757 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 RAB40CQ96S21 281 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 RTL8AQ9BWD3 113 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 ZNF442Q9H7R0 627 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 SMCO4Q9NRQ5 59 aa3.99□□□□□ -1.77
EDEM3-203ENST00000439962 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.98□□□□□ -1.77
EDEM3-203ENST00000439962 WNT9BO14905 357 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 PPIHO43447 177 aaKnown RBP3.98□□□□□ -1.77
EDEM3-203ENST00000439962 TIMM8AO60220 97 aaPredicted RBP3.98□□□□□ -1.77
EDEM3-203ENST00000439962 LY6G6DO95868 133 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 IGKV3-15P01624 115 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 CBR1P16152 277 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 AADACP22760 399 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 HOXA1P49639 335 aaPredicted RBP3.98□□□□□ -1.77
EDEM3-203ENST00000439962 PRB3Q04118 309 aaPredicted RBP3.98□□□□□ -1.77
EDEM3-203ENST00000439962 HFEQ30201 348 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 SMUG1Q53HV7 270 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 NMSQ5H8A3 153 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 FAM201AQ5SY85 155 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 SLC25A26Q70HW3 274 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 H1FOOQ8IZA3 346 aaPredicted RBP3.98□□□□□ -1.77
EDEM3-203ENST00000439962 SELENOHQ8IZQ5 122 aaKnown RBP3.98□□□□□ -1.77
EDEM3-203ENST00000439962 PUSL1Q8N0Z8 303 aaKnown RBP3.98□□□□□ -1.77
EDEM3-203ENST00000439962 C17orf78Q8N4C9 275 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 OR2C3Q8N628 320 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 DEFB108BQ8NET1 73 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 OR2Z1Q8NG97 314 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 OR56B2PQ8NGI1 322 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms