RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 PROK2Q9HC23 129 aa11.5□□□□□ -0.57
PCNX3-202ENST00000439247 FKBP11Q9NYL4 201 aa11.5□□□□□ -0.57
PCNX3-202ENST00000439247 ZNF292O60281 2723 aa11.5□□□□□ -0.57
PCNX3-202ENST00000439247 FAM186AA6NE01 2351 aa11.5□□□□□ -0.57
PCNX3-202ENST00000439247 CRYAAP02489 173 aa11.5□□□□□ -0.57
PCNX3-202ENST00000439247 GYPAP02724 150 aa11.5□□□□□ -0.57
PCNX3-202ENST00000439247 PDLIM4P50479 330 aa11.5□□□□□ -0.57
PCNX3-202ENST00000439247 TCF15Q12870 199 aa11.5□□□□□ -0.57
PCNX3-202ENST00000439247 FAM78BQ5VT40 261 aa11.5□□□□□ -0.57
PCNX3-202ENST00000439247 OR2T10Q8NGZ9 312 aa11.5□□□□□ -0.57
PCNX3-202ENST00000439247 SDSLQ96GA7 329 aa11.5□□□□□ -0.57
PCNX3-202ENST00000439247 RAB40CQ96S21 281 aa11.5□□□□□ -0.57
PCNX3-202ENST00000439247 SEMA5BQ9P283 1151 aa11.5□□□□□ -0.57
PCNX3-202ENST00000439247 RIF1Q5UIP0 2472 aaKnown RBP11.49□□□□□ -0.57
PCNX3-202ENST00000439247 CD300LBA8K4G0 201 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 M0R143 59 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 LILRA1O75019 489 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 NPPCP23582 126 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 GCH1P30793 250 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 GBGT1Q8N5D6 347 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 TAF15Q92804 592 aaKnown RBP eCLIP11.49□□□□□ -0.57
PCNX3-202ENST00000439247 IL22RA2Q969J5 263 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 SGCZQ96LD1 299 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 OR6C3Q9NZP0 311 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 GRIFINA4D1Z8 144 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 ZNF705FA8MVS1 300 aaPredicted RBP11.49□□□□□ -0.57
PCNX3-202ENST00000439247 PRR33A8MZF0 331 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 PAGE4O60829 102 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 ZNF705DP0CH99 300 aaPredicted RBP11.49□□□□□ -0.57
PCNX3-202ENST00000439247 ZNF705BP0CI00 300 aaPredicted RBP11.49□□□□□ -0.57
PCNX3-202ENST00000439247 COL8A2P25067 703 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 ERVFC1-1P60608 527 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 ATP23Q9Y6H3 246 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 A0A0G2JMM0 328 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 A0A1W2PPB8 328 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 A0A1W2PRS3 328 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 KIR3DP1A8MWS1 328 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 IGLV2-14P01704 120 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 RAB4BP61018 213 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 IQCJQ1A5X6 159 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 TMEM164Q5U3C3 297 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 ZNF324BQ6AW86 544 aaPredicted RBP11.49□□□□□ -0.57
PCNX3-202ENST00000439247 PRSS33Q8NF86 280 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 LOXL4Q96JB6 756 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 DERL1Q9BUN8 251 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 OCIAD1Q9NX40 245 aa11.49□□□□□ -0.57
PCNX3-202ENST00000439247 KIAA1549Q9HCM3 1950 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 A0A096LPE4 126 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 DUXBA0A1W2PPF3 345 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 A0A1W2PPZ6 126 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 IFNA1P01562 189 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 CST2P09228 141 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 IL3RAP26951 378 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 CNN1P51911 297 aaKnown RBP11.48□□□□□ -0.57
PCNX3-202ENST00000439247 PRDX4Q13162 271 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 BATFQ16520 125 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 FAM53AQ6NSI3 398 aaPredicted RBP11.48□□□□□ -0.57
PCNX3-202ENST00000439247 ACY3Q96HD9 319 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 FOXB1Q99853 325 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 TMEM208Q9BTX3 173 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 NCKAP5O14513 1909 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 IGHV3-64DA0A0J9YX35 117 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 CD59P13987 128 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 HNF1AP20823 631 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 SLC38A11Q08AI6 406 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 RNPS1Q15287 305 aaKnown RBP11.48□□□□□ -0.57
PCNX3-202ENST00000439247 SPINK9Q5DT21 86 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 TGIF2LYQ8IUE0 185 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 TBX15Q96SF7 602 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 PSMG3Q9BT73 122 aaPredicted RBP11.48□□□□□ -0.57
PCNX3-202ENST00000439247 PARD6AQ9NPB6 346 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 OR2W1Q9Y3N9 320 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 CACNA1DQ01668 2161 aa11.48□□□□□ -0.57
PCNX3-202ENST00000439247 A0A0U1RQK1 487 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 ZNF320A2RRD8 509 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 WDR1O75083 606 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 LIFP15018 202 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 PSMB3P49720 205 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 UBE2G2P60604 165 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 AAED1Q7RTV5 226 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 OR10J5Q8NHC4 309 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 OR51B6Q9H340 312 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 NAGKQ9UJ70 344 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 KCNS2Q9ULS6 477 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 USF3Q68DE3 2245 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 CLDN1O95832 211 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 MBP02144 154 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 IRF2P14316 349 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 RAB4AP20338 218 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 SERF2P84101 59 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 TFF3Q07654 80 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 ZNF585BQ52M93 769 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 ZNF114Q8NC26 417 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 AGMATQ9BSE5 352 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 TMEM204Q9BSN7 226 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 ZNF552Q9H707 407 aaPredicted RBP11.47□□□□□ -0.57
PCNX3-202ENST00000439247 DCHS1Q96JQ0 3298 aa11.47□□□□□ -0.57
PCNX3-202ENST00000439247 TP53I11O14683 189 aa11.46□□□□□ -0.57
PCNX3-202ENST00000439247 CXCL13O43927 109 aa11.46□□□□□ -0.57
PCNX3-202ENST00000439247 VAMP5O95183 116 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms