RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 SNX22Q96L94 193 aa9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 NMES1Q9C002 83 aa9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 STRAPQ9Y3F4 350 aaKnown RBP9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 hADV38S2A0JD32 116 aa9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 COX6B1P14854 86 aa9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 RPL29P47914 159 aaKnown RBP9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 CEBPDP49716 269 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 ZNF787Q6DD87 383 aa9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 ZNF66Q6ZN08 573 aa9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 SAXO1Q8IYX7 474 aa9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 LILRB1Q8NHL6 650 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 OR5P3Q8WZ94 311 aa9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 TRAV34A0A0B4J273 112 aa9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 J3QW42 95 aa9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 MMP9P14780 707 aa9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 MYPOPQ86VE0 399 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 OR2C3Q8N628 320 aa9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 ADGRG7Q96K78 797 aa9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 MS4A5Q9H3V2 200 aa9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 WIPI2Q9Y4P8 454 aa9.89□□□□□ -0.83
TRAPPC9-202ENST00000438773 CD8AP01732 235 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 DVL1P1P54792 670 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 ZNF154Q13106 437 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 CYB5R2Q6BCY4 276 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 BTNL3Q6UXE8 466 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 TMEM68Q96MH6 324 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 C5orf66Q9H5L9 145 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 PNRC2Q9NPJ4 139 aaKnown RBP9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 GTF3C1Q12789 2109 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 C17orf112F2Z3M2 114 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 SMPD2O60906 423 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 KITLGP21583 273 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 NAAAQ02083 359 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 COL10A1Q03692 680 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 PSG7Q13046 419 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 LY6DQ14210 128 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 NSUN5P2Q63ZY6 315 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 DBX2Q6ZNG2 339 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 MRGPRFQ96AM1 343 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 CIB3Q96Q77 187 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 LPAR3Q9UBY5 353 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 RHBDL1O75783 438 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 IGFBP7Q16270 282 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 RNFT1Q5M7Z0 435 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 TIMM23BQ5SRD1 257 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 AP1S3Q96PC3 154 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 TXN2Q99757 166 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 TM2D1Q9BX74 207 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 SLC2A8Q9NY64 477 aa9.88□□□□□ -0.83
TRAPPC9-202ENST00000438773 PPP1CCP36873 323 aaKnown RBP9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 TAS2R30P59541 319 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 NHLH2Q02577 135 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 COMMD5Q9GZQ3 224 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 ZMAT5Q9UDW3 170 aaKnown RBP9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 USF3Q68DE3 2245 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 WIPF3A6NGB9 483 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 SS18L1O75177 396 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 METTL15P1P0C7V9 234 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 CHRNA7P36544 502 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 ZNF383Q8NA42 475 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 NRIP2Q9BQI9 281 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 FBLN5Q9UBX5 448 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 KLF2Q9Y5W3 355 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 ADAMTS9Q9P2N4 1935 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 NKX2-6A6NCS4 301 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 PPIHO43447 177 aaKnown RBP9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 SULT1A1P50225 295 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 RUNX1Q01196 453 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 IL24Q13007 206 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 UQCC3Q6UW78 93 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 TRANK1O15050 2925 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 IL34Q6ZMJ4 242 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 C1orf162Q8NEQ5 155 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 SLC35B3Q9H1N7 401 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 COA4Q9NYJ1 87 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 MTCH1Q9NZJ7 389 aa9.87□□□□□ -0.83
TRAPPC9-202ENST00000438773 ZNF320A2RRD8 509 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 MSGN1A6NI15 193 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 PLA2G5P39877 138 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 FOXF2Q12947 444 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 RAB40CQ96S21 281 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 AP4M1O00189 453 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 RAB5AP20339 215 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 PSMB3P49720 205 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 RAB7AP51149 207 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 FAM57AQ8TBR7 257 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 WFIKKN1Q96NZ8 548 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 GAL3ST2Q9H3Q3 398 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 ZNF665Q9H7R5 613 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 ZDHHC11Q9H8X9 412 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 BTBD17A6NE02 478 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 CNIH1O95406 144 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 CDS2O95674 445 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 ZNF345Q14585 488 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 ANKRD55Q3KP44 614 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 RNF144BQ7Z419 303 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 OR13D1Q8NGV5 346 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 MOB3AQ96BX8 217 aa9.86□□□□□ -0.83
TRAPPC9-202ENST00000438773 MGST3O14880 152 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms