RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 NPIPB9F8W1W9 429 aa9.66□□□□□ -0.86
SEMA4D-211ENST00000438547 SMPD2O60906 423 aa9.66□□□□□ -0.86
SEMA4D-211ENST00000438547 IGHMP01871 453 aa9.66□□□□□ -0.86
SEMA4D-211ENST00000438547 APCSP02743 223 aa9.66□□□□□ -0.86
SEMA4D-211ENST00000438547 IGKV3-11P04433 115 aa9.66□□□□□ -0.86
SEMA4D-211ENST00000438547 PAFAH1B2P68402 229 aa9.66□□□□□ -0.86
SEMA4D-211ENST00000438547 HES3Q5TGS1 186 aa9.66□□□□□ -0.86
SEMA4D-211ENST00000438547 OR2D3Q8NGH3 330 aa9.66□□□□□ -0.86
SEMA4D-211ENST00000438547 OR52L2PQ8NGH6 319 aa9.66□□□□□ -0.86
SEMA4D-211ENST00000438547 CEP250Q9BV73 2442 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 PQLC2LA1A4F0 135 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 TMEM229AB2RXF0 380 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 BRS3P32247 399 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 GABRA6Q16445 453 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 DCAF10Q5QP82 559 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 C10orf113Q5VZT2 155 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 VWA1Q6PCB0 445 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 FGFRL1Q8N441 504 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 STXBP6Q8NFX7 210 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 OR1P1Q8NH06 330 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 TMEM74BQ9NUR3 256 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 PXMP4Q9Y6I8 212 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 ZNHIT1O43257 154 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 MPDU1O75352 247 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 HBZP02008 142 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 HIST1H1EP10412 219 aaKnown RBP9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 ATRAIDQ6UW56 229 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 OR1L8Q8NGR8 309 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 FLYWCH2Q96CP2 140 aaKnown RBP9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 TXNDC17Q9BRA2 123 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 CLEC1BQ9P126 229 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 CARHSP1Q9Y2V2 147 aaKnown RBP9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 SCN10AQ9Y5Y9 1956 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 GCGP01275 180 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 TGIF2LYQ8IUE0 185 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 MAP1LC3CQ9BXW4 147 aa9.65□□□□□ -0.86
SEMA4D-211ENST00000438547 ZNF318Q5VUA4 2279 aa9.65□□□□□ -0.87
SEMA4D-211ENST00000438547 SIPA1L1O43166 1804 aa9.65□□□□□ -0.87
SEMA4D-211ENST00000438547 LINC00587B1AMM8 73 aa9.65□□□□□ -0.87
SEMA4D-211ENST00000438547 MELTFP08582 738 aa9.65□□□□□ -0.87
SEMA4D-211ENST00000438547 PRDX2P32119 198 aa9.65□□□□□ -0.87
SEMA4D-211ENST00000438547 MFAP2P55001 183 aa9.65□□□□□ -0.87
SEMA4D-211ENST00000438547 UCP3P55916 312 aa9.65□□□□□ -0.87
SEMA4D-211ENST00000438547 RPL24P83731 157 aaKnown RBP9.65□□□□□ -0.87
SEMA4D-211ENST00000438547 WDR25Q64LD2 544 aaPredicted RBP9.65□□□□□ -0.87
SEMA4D-211ENST00000438547 C5orf17Q8NAS9 161 aa9.65□□□□□ -0.87
SEMA4D-211ENST00000438547 HSPB9Q9BQS6 159 aa9.65□□□□□ -0.87
SEMA4D-211ENST00000438547 LOC101059948A0A1B0GTJ6 334 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 ISLRO14498 428 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 OR2H2O95918 312 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 COL10A1Q03692 680 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 RIGQ13278 110 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 COL5A1-AS1Q5SY13 56 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 NFAM1Q8NET5 270 aaPredicted RBP9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 OR2V2Q96R30 315 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 RBKSQ9H477 322 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 GSN-AS1Q9NRJ2 163 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 A0A1W2PPE3 182 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 PATE3B3GLJ2 98 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 PRSS1P07477 247 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 SUCLG1P53597 346 aaKnown RBP9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 TMEM251Q8N6I4 163 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 PERPQ96FX8 193 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 GMPPAQ96IJ6 420 aaPredicted RBP9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 TTTY12Q9BZ98 90 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 DLL3Q9NYJ7 618 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 KCNMB2Q9Y691 235 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 RBBP6Q7Z6E9 1792 aaKnown RBP9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 RNF222A6NCQ9 220 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 CLDN14O95500 239 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 WNT5AP41221 380 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 RIPPLY2Q5TAB7 128 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 CYB5R2Q6BCY4 276 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 SLC25A45Q8N413 288 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 CISD1Q9NZ45 108 aaKnown RBP9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 WIPI2Q9Y4P8 454 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 AMMECR1Q9Y4X0 333 aaPredicted RBP9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 TAF1LQ8IZX4 1826 aa9.64□□□□□ -0.87
SEMA4D-211ENST00000438547 SPEM2Q0P670 501 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 TMEM97Q5BJF2 176 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 KHDC1LQ5JSQ8 128 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 LINC00114Q6XXX2 140 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 NAGKQ9UJ70 344 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 RGPD4Q7Z3J3 1758 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 IGHV3OR15-7A0A075B7D8 119 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 IGHV1-45A0A0A0MS14 117 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 FAM90A26D6RGX4 464 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 CD99P14209 185 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 CEACAM3P40198 252 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 SLC35B1P78383 322 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 METTL1Q9UBP6 276 aaKnown RBP9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 OR51B2Q9Y5P1 312 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 TRAV14DV4A0A0A6YYC5 116 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 PPIHO43447 177 aaKnown RBP9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 MT-ND6P03923 174 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 TRGC1P0CF51 173 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 SCGB1C2P0DMR2 95 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 ACP1P24666 158 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 GLIPR1P48060 266 aa9.63□□□□□ -0.87
SEMA4D-211ENST00000438547 ZNF343Q6P1L6 599 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms