RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 RUNX1Q01196 453 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 LRRC36Q1X8D7 754 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 RBM48Q5RL73 367 aaKnown RBP6.04□□□□□ -1.44
VPS50-203ENST00000436177 C6orf141Q5SZD1 244 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 PYHIN1Q6K0P9 492 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 FAM131AQ6UXB0 335 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 C8orf59Q8N0T1 100 aaPredicted RBP6.04□□□□□ -1.44
VPS50-203ENST00000436177 DHRSXQ8N5I4 330 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 TCTEX1D1Q8N7M0 179 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 ZNF491Q8N8L2 437 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 OR6Q1Q8NGQ2 317 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 PGLYRP3Q96LB9 341 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 YPEL2Q96QA6 119 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 NABP2Q9BQ15 211 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 ANKRD60Q9BZ19 345 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 KLK15Q9H2R5 256 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 VCXQ9H320 206 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 GNB4Q9HAV0 340 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 PIPOXQ9P0Z9 390 aa6.04□□□□□ -1.44
VPS50-203ENST00000436177 LSM4Q9Y4Z0 139 aaKnown RBP6.04□□□□□ -1.44
VPS50-203ENST00000436177 SAA2-SAA4A0A096LPE2 208 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 IGHV7-81A0A0B4J1V7 117 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 OR5H14A6NHG9 310 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 LINC01619G3V211 115 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 I3L521 148 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 EBAG9O00559 213 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 RRHO14718 337 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 RAB29O14966 203 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 RBBP9O75884 186 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 LGALS1P09382 135 aaKnown RBP6.03□□□□□ -1.44
VPS50-203ENST00000436177 OR8U9P0C7N5 309 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 SAA2P0DJI9 122 aaPredicted RBP6.03□□□□□ -1.44
VPS50-203ENST00000436177 MC5RP33032 325 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 VHLP40337 213 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 OR3A3P47888 321 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 RAB9AP51151 201 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 WNT4P56705 351 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 RPS11P62280 158 aaKnown RBP eCLIP6.03□□□□□ -1.44
VPS50-203ENST00000436177 GNB1P62873 340 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 GLT8D1Q68CQ7 371 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 ZNF660Q6AZW8 331 aaPredicted RBP6.03□□□□□ -1.44
VPS50-203ENST00000436177 FAM71F2Q6NXP2 309 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 ZNF833PQ6ZTB9 187 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 AHSA2Q719I0 299 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 GAPTQ8N292 157 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 PACRGLQ8N7B6 248 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 KCNG3Q8TAE7 436 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 MRPL30Q8TCC3 161 aaKnown RBP6.03□□□□□ -1.44
VPS50-203ENST00000436177 MYOZ3Q8TDC0 251 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 DCUN1D4Q92564 292 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 ARPC1AQ92747 370 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 FLYWCH2Q96CP2 140 aaKnown RBP6.03□□□□□ -1.44
VPS50-203ENST00000436177 RCHY1Q96PM5 261 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 OR4C12Q96R67 309 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 ELOVL1Q9BW60 279 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 ZMAT4Q9H898 229 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 MBNL3Q9NUK0 354 aaKnown RBP6.03□□□□□ -1.44
VPS50-203ENST00000436177 CNOT2Q9NZN8 540 aaKnown RBP6.03□□□□□ -1.44
VPS50-203ENST00000436177 SLC23A1Q9UHI7 598 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 SCOCQ9UIL1 159 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 WASHC3Q9Y3C0 194 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 RYR3Q15413 4870 aa6.03□□□□□ -1.44
VPS50-203ENST00000436177 EREGO14944 169 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 ARPC1BO15143 372 aaKnown RBP6.02□□□□□ -1.45
VPS50-203ENST00000436177 APOA2P02652 100 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 LYL1P12980 280 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 CPEP16870 476 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 RAB6AP20340 208 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 CNTFRP26992 372 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 PPIFP30405 207 aaKnown RBP6.02□□□□□ -1.45
VPS50-203ENST00000436177 TPPP2P59282 170 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 RPS27AP62979 156 aaKnown RBP6.02□□□□□ -1.45
VPS50-203ENST00000436177 CX3CL1P78423 397 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 MRPS15P82914 257 aaKnown RBP6.02□□□□□ -1.45
VPS50-203ENST00000436177 CBX3Q13185 183 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 HMGN3Q15651 99 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 ACTBL2Q562R1 376 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 SIGIRRQ6IA17 410 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 UNQ5815/PRO19632Q6UWF5 114 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 C6orf201Q7Z4U5 140 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 PPP1R27Q86WC6 154 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 MS4A15Q8N5U1 240 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 BPIFB6Q8NFQ5 453 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 NPBQ8NG41 125 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 MUC7Q8TAX7 377 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 PHYHIPQ92561 330 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 TSNAXQ99598 290 aaKnown RBP6.02□□□□□ -1.45
VPS50-203ENST00000436177 SULT4A1Q9BR01 284 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 URM1Q9BTM9 101 aaKnown RBP6.02□□□□□ -1.45
VPS50-203ENST00000436177 FAAP24Q9BTP7 215 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 TMED9Q9BVK6 235 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 MND1Q9BWT6 205 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 IFI27L2Q9H2X8 130 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 RIMS4Q9H426 269 aaPredicted RBP6.02□□□□□ -1.45
VPS50-203ENST00000436177 FBXL15Q9H469 300 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 PLGRKTQ9HBL7 147 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 ZNF355PQ9NSJ1 428 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 PLEKHJ1Q9NW61 149 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 ZNF221Q9UK13 617 aa6.02□□□□□ -1.45
VPS50-203ENST00000436177 MGAT4AQ9UM21 535 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms