RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	DLK1	P80370	383 aa		13.49	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	PMS2P11	Q13670	270 aa		13.49	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	ADAM5	Q6NVV9	412 aa		13.49	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.49	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	RCC1L	Q96I51	464 aa	Known RBP	13.49	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	OR2D2	Q9H210	308 aa		13.49	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	SEBOX	Q9HB31	216 aa	Predicted RBP	13.49	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	TTC28	Q96AY4	2481 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	CXorf65	A6NEN9	183 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	NKX2-8	O15522	239 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	RAMP3	O60896	148 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	SMIM6	P0DI80	62 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	BCL2	P10415	239 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	TAGLN2	P37802	199 aa	Known RBP	13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	BRWD1-AS2	P59051	145 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	RPL30	P62888	115 aa	Known RBP	13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	S100A12	P80511	92 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	FAM90A2P	Q658T7	463 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	WDR82	Q6UXN9	313 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145		Q6ZR03	302 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	PIP4P1	Q86T03	277 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	C9orf106	Q8NAJ2	232 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	FDCSP	Q8NFU4	85 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	OR52L2P	Q8NGH6	319 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	NIPSNAP3B	Q9BS92	247 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	RBKS	Q9H477	322 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	SIRT7	Q9NRC8	400 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	TIMM9	Q9Y5J7	89 aa		13.48	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	IGLV1-44	P01699	117 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	IL2RG	P31785	369 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	PAX5	Q02548	391 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	TMEM41B	Q5BJD5	291 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	SPANXN5	Q5MJ07	72 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	ZNF787	Q6DD87	383 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	VWA1	Q6PCB0	445 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	SSX7	Q7RTT5	188 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	LILRB2	Q8N423	598 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	TCTEX1D1	Q8N7M0	179 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	PINX1	Q96BK5	328 aa	Known RBP	13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	ZNF665	Q9H7R5	613 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	GNG13	Q9P2W3	67 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	IFNL4	K9M1U5	179 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	AGFG2	O95081	481 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	CECR9	P0C854	216 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	AES	Q08117	197 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	SLC38A11	Q08AI6	406 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	FAM53A	Q6NSI3	398 aa	Predicted RBP	13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	CNEP1R1	Q8N9A8	125 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	TAF15	Q92804	592 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	BCL2L14	Q9BZR8	327 aa		13.47	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	PCNX2	A6NKB5	2137 aa		13.46	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	LRRC30	A6NM36	301 aa		13.46	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	ZNF727	A8MUV8	499 aa		13.46	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	PRR33	A8MZF0	331 aa		13.46	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	IFNA17	P01571	189 aa		13.46	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	GLIPR1	P48060	266 aa		13.46	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	CCL11	P51671	97 aa		13.46	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	OR2B8P	P59922	312 aa		13.46	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	FABP9	Q0Z7S8	132 aa		13.46	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	SRSF6	Q13247	344 aa	Known RBP	13.46	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	CXorf67	Q86X51	503 aa	Predicted RBP	13.46	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145	CA5BP1	Q8WTZ4	195 aa		13.46	□□□□□ -0.25
HLA-DQB2-231	ENST00000435145		B4DEV8	164 aa		13.46	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	AP4M1	O00189	453 aa		13.46	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	PTBP3	O95758	552 aa	Known RBP	13.46	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	HOXC12	P31275	282 aa		13.46	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CEBPG	P53567	150 aa		13.46	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CTAG1A	P78358	180 aa		13.46	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CATR1	Q13166	79 aa		13.46	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ELOB	Q15370	118 aa		13.46	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	PRAMEF6	Q5VXH4	476 aa		13.46	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	MBNL2	Q5VZF2	373 aa	Known RBP	13.46	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	RBMS3	Q6XE24	437 aa	Known RBP	13.46	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	LURAP1	Q96LR2	239 aa		13.46	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	P2RX4	Q99571	388 aa		13.46	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	MRPL37	Q9BZE1	423 aa	Known RBP	13.46	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	PLSCR4	Q9NRQ2	329 aa		13.46	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ODAM	A1E959	279 aa		13.45	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	PMS2P5	A8MQ11	134 aa		13.45	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	C17orf98	A8MV24	154 aa		13.45	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	S1PR2	O95136	353 aa		13.45	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	G6PC	P35575	357 aa		13.45	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	HOXA4	Q00056	320 aa	Predicted RBP	13.45	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	LCN15	Q6UWW0	184 aa		13.45	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145		Q8WTZ3	238 aa		13.45	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ASCL3	Q9NQ33	180 aa		13.45	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.45	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CACNA1G	O43497	2377 aa		13.45	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	TRAV17	A0A0B4J275	112 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	RAB29	O14966	203 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	TIMM8A	O60220	97 aa	Predicted RBP	13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CLDN14	O95500	239 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CLDN1	O95832	211 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	KRAS	P01116	189 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	PNRC1	Q12796	327 aa	Predicted RBP	13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ATP6V1F	Q16864	119 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	SMIM21	Q3B7S5	101 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ZNF66	Q6ZN08	573 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	MRGPRG	Q86SM5	289 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ZNF808	Q8N4W9	903 aa	Predicted RBP	13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms