RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SELENOHQ8IZQ5 122 aaKnown RBP6.41□□□□□ -1.38
CPSF6-202ENST00000435070 LRTM2Q8N967 370 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 ADPRHL1Q8NDY3 354 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 ZPBPQ9BS86 351 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 TMEM222Q9H0R3 208 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 ZNF586Q9NXT0 402 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 CRISP2P16562 243 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 PAX9P55771 341 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 UBE2V1Q13404 147 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 CNN3Q15417 329 aaKnown RBP6.41□□□□□ -1.38
CPSF6-202ENST00000435070 SP5Q6BEB4 398 aaPredicted RBP6.41□□□□□ -1.38
CPSF6-202ENST00000435070 Q8NFD4 153 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 OR10V1Q8NGI7 309 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.41□□□□□ -1.38
CPSF6-202ENST00000435070 MOB3AQ96BX8 217 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 SIT1Q9Y3P8 196 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 A0A0G2JRQ6 117 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 A0A1W2PNR3 127 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 DUXBA0A1W2PPF3 345 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 DNPH1O43598 174 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 GDF9O60383 454 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 KIAA1644Q3SXP7 199 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 SGK494Q96LW2 274 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 OR6C1Q96RD1 312 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 NGBQ9NPG2 151 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 AQP7P3A6NL99 342 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 FOXI3A8MTJ6 420 aaPredicted RBP6.41□□□□□ -1.38
CPSF6-202ENST00000435070 H3BVH4 76 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 IGKV1D-33P01593 117 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 IGKV1-33P01594 117 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 OR10J4P0C629 311 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 SOX8P57073 446 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 TEX43Q6ZNM6 134 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 RPP25LQ8N5L8 163 aaKnown RBP6.41□□□□□ -1.38
CPSF6-202ENST00000435070 LYZL4Q96KX0 146 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 C12orf49Q9H741 205 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 CCL28Q9NRJ3 127 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 HEATR1Q9H583 2144 aaKnown RBP6.41□□□□□ -1.38
CPSF6-202ENST00000435070 A0A1W2PPV4 95 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 NPIPB7O75200 414 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 CELA2BP08218 269 aaPredicted RBP6.4□□□□□ -1.38
CPSF6-202ENST00000435070 STAG3L3P0CL85 134 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 HES3Q5TGS1 186 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 LINC00696Q6ZRV3 163 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 ZNF738Q8NE65 137 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 Q96M66 194 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 C11orf1Q9H5F2 150 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 RALGAPA1Q6GYQ0 2036 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 BRWD1Q9NSI6 2320 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 LOC102725191A0A1B0GVB3 256 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 FRMD6-AS1P0C7T7 363 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 DTYMKP23919 212 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 MPLP40238 635 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 CRIP3Q6Q6R5 217 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.4□□□□□ -1.38
CPSF6-202ENST00000435070 KMT5CQ86Y97 462 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 WDYHV1Q96HA8 205 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 SIGLEC12Q96PQ1 595 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 OR4C12Q96R67 309 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 P2RX4Q99571 388 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 DERL1Q9BUN8 251 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 PLEK2Q9NYT0 353 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 FBXL7Q9UJT9 491 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 MYBPHQ13203 477 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 ZDHHC23Q8IYP9 409 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 SIGLECL1Q8N7X8 197 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 LOXL4Q96JB6 756 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 ZBP1Q9H171 429 aa6.4□□□□□ -1.38
CPSF6-202ENST00000435070 TRAV1-1A0A0B4J248 108 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 TRAPPC2LH3BP13 241 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 AMTP48728 403 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 ID3Q02535 119 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 ZNF818PQ6ZRF7 136 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 C9orf40Q8IXQ3 194 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 OR2M3Q8NG83 312 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 UHRF2Q96PU4 802 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 ST3GAL6Q9Y274 331 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 PIGBOS1A0A0B4J2F0 54 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 ZNF133P52736 654 aaPredicted RBP6.4□□□□□ -1.39
CPSF6-202ENST00000435070 BAXQ07812 192 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 FBLN7Q53RD9 439 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 PRR27Q6MZM9 219 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 ZNF501Q96CX3 271 aaPredicted RBP6.4□□□□□ -1.39
CPSF6-202ENST00000435070 BOKQ9UMX3 212 aaPredicted RBP6.4□□□□□ -1.39
CPSF6-202ENST00000435070 RAB29O14966 203 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 TFF2Q03403 129 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 SHBQ15464 509 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 OR2M7Q8NG81 312 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 SLC37A2Q8TED4 501 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 TP53TG3Q9ULZ0 132 aa6.4□□□□□ -1.39
CPSF6-202ENST00000435070 IGKV1D-13A0A0B4J2D9 117 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 ZNHIT1O43257 154 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 CLPSP04118 112 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 IGKV1-13P0DP09 117 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 VDAC1P21796 283 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 ZNF718Q3SXZ3 478 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 PSENENQ9NZ42 101 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 PXMP4Q9Y6I8 212 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 PRR19A6NJB7 356 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 F6UZH7 168 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms