RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 DEFA6Q01524 100 aa0.71□□□□□ -2.3
LINC01239-201ENST00000433645 FLOT2Q14254 428 aa0.71□□□□□ -2.3
LINC01239-201ENST00000433645 EXOC3L4Q17RC7 722 aa0.71□□□□□ -2.3
LINC01239-201ENST00000433645 TMEM249Q2WGJ8 235 aa0.71□□□□□ -2.3
LINC01239-201ENST00000433645 TRMT12Q53H54 448 aaKnown RBP0.71□□□□□ -2.3
LINC01239-201ENST00000433645 HSP90B2PQ58FF3 399 aa0.71□□□□□ -2.3
LINC01239-201ENST00000433645 LRRC20Q8TCA0 184 aa0.71□□□□□ -2.3
LINC01239-201ENST00000433645 PPWD1Q96BP3 646 aaKnown RBP0.71□□□□□ -2.3
LINC01239-201ENST00000433645 MSANTD3Q96H12 275 aa0.71□□□□□ -2.3
LINC01239-201ENST00000433645 NUP153P49790 1475 aaKnown RBP0.71□□□□□ -2.3
LINC01239-201ENST00000433645 A0A1B0GW15 77 aa0.7□□□□□ -2.3
LINC01239-201ENST00000433645 OR5K4A6NMS3 321 aa0.7□□□□□ -2.3
LINC01239-201ENST00000433645 ZNF705FA8MVS1 300 aaPredicted RBP0.7□□□□□ -2.3
LINC01239-201ENST00000433645 STK16O75716 305 aa0.7□□□□□ -2.3
LINC01239-201ENST00000433645 CDK14O94921 469 aa0.7□□□□□ -2.3
LINC01239-201ENST00000433645 LDOC1O95751 146 aaPredicted RBP0.7□□□□□ -2.3
LINC01239-201ENST00000433645 FADS2O95864 444 aaKnown RBP0.7□□□□□ -2.3
LINC01239-201ENST00000433645 UCHL1P09936 223 aa0.7□□□□□ -2.3
LINC01239-201ENST00000433645 ZNF728P0DKX0 622 aa0.7□□□□□ -2.3
LINC01239-201ENST00000433645 CCL3P10147 92 aa0.7□□□□□ -2.3
LINC01239-201ENST00000433645 XCL1P47992 114 aa0.7□□□□□ -2.3
LINC01239-201ENST00000433645 KCNJ3P48549 501 aa0.7□□□□□ -2.3
LINC01239-201ENST00000433645 CARD18P57730 90 aa0.7□□□□□ -2.3
LINC01239-201ENST00000433645 OR10A3P58181 314 aa0.7□□□□□ -2.3
LINC01239-201ENST00000433645 ERHP84090 104 aaKnown RBP0.7□□□□□ -2.3
LINC01239-201ENST00000433645 LHFPL1Q86WI0 220 aa0.7□□□□□ -2.3
LINC01239-201ENST00000433645 ACBD6Q9BR61 282 aa0.7□□□□□ -2.3
LINC01239-201ENST00000433645 MIEN1Q9BRT3 115 aa0.7□□□□□ -2.3
LINC01239-201ENST00000433645 NKX6-2Q9C056 277 aaPredicted RBP0.7□□□□□ -2.3
LINC01239-201ENST00000433645 DNAJC12Q9UKB3 198 aa0.7□□□□□ -2.3
LINC01239-201ENST00000433645 DSCAMO60469 2012 aa0.7□□□□□ -2.3
LINC01239-201ENST00000433645 CHD2O14647 1828 aaKnown RBP0.7□□□□□ -2.3
LINC01239-201ENST00000433645 CLUHO75153 1309 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 MEIKINA0A087WXM9 373 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 TRGV5A0A0B4J1U4 118 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 TRAV41A0A0B4J266 112 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 ZW10O43264 779 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 SGCEO43556 437 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 SNAP29O95721 258 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 IVLP07476 585 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 CCL2P13500 99 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 NUP62P37198 522 aaPredicted RBP0.69□□□□□ -2.3
LINC01239-201ENST00000433645 TAS2R45P59539 299 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 UBE2KP61086 200 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 TBC1D28Q2M2D7 210 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 OR10J3Q5JRS4 329 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 TTC33Q6PID6 262 aaPredicted RBP0.69□□□□□ -2.3
LINC01239-201ENST00000433645 UNQ6190/PRO20217Q6UXQ8 127 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 TMEM75Q8N9X5 138 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 OR5J2Q8NH18 312 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 LRRC39Q96DD0 335 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 ABHD14BQ96IU4 210 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 TRNT1Q96Q11 434 aaKnown RBP0.69□□□□□ -2.3
LINC01239-201ENST00000433645 GNB1LQ9BYB4 327 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 MED28Q9H204 178 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 SOX21Q9Y651 276 aaPredicted RBP0.69□□□□□ -2.3
LINC01239-201ENST00000433645 TENM3Q9P273 2699 aa0.69□□□□□ -2.3
LINC01239-201ENST00000433645 PTPRBP23467 1997 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 MYH11P35749 1972 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 DLG5Q8TDM6 1919 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 DICER1Q9UPY3 1922 aaKnown RBP0.68□□□□□ -2.3
LINC01239-201ENST00000433645 IGKV2-40A0A087WW87 121 aaPredicted RBP0.68□□□□□ -2.3
LINC01239-201ENST00000433645 A0A1B0GVG6 124 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 A8MUN3 132 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 NDUFS8O00217 210 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 SYNGR1O43759 233 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 NDUFB2O95178 105 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 PSMG1O95456 288 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 IGKV2D-40P01614 121 aaPredicted RBP0.68□□□□□ -2.3
LINC01239-201ENST00000433645 IGHV1-69P01742 117 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 C1QCP02747 245 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 CCDC172P0C7W6 258 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 ORM2P19652 201 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 FBN2P35556 2912 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 TNNC1P63316 161 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 XIAPP98170 497 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 GLO1Q04760 184 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 OR4D1Q15615 310 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 DOLPP1Q86YN1 238 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 PLCZ1Q86YW0 608 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 OR2D3Q8NGH3 330 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 CCDC127Q96BQ5 260 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 C8orf4Q9NR00 106 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 SNX10Q9Y5X0 201 aa0.68□□□□□ -2.3
LINC01239-201ENST00000433645 FREM1Q5H8C1 2179 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 TMSB15BA0A087X1C1 80 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 OR11H12B2RN74 326 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 C9J4A7 227 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 F5H5K5 113 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 LIN7AO14910 233 aaPredicted RBP0.67□□□□□ -2.3
LINC01239-201ENST00000433645 LIMS3P0CW19 117 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 LIMS4P0CW20 117 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 IL9P15248 144 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 SULT1A2P50226 295 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 RPL14P50914 215 aaKnown RBP0.67□□□□□ -2.3
LINC01239-201ENST00000433645 CTBP2P56545 445 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 RAB31Q13636 194 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 TMEM42Q69YG0 159 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 OR10K2Q6IF99 312 aa0.67□□□□□ -2.3
LINC01239-201ENST00000433645 CNEP1R1Q8N9A8 125 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms