RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 YPEL2Q96QA6 119 aa4.61□□□□□ -1.67
HMGB3P24-201ENST00000433260 ST6GALNAC5Q9BVH7 336 aa4.61□□□□□ -1.67
HMGB3P24-201ENST00000433260 PRSS22Q9GZN4 317 aa4.61□□□□□ -1.67
HMGB3P24-201ENST00000433260 NAA50Q9GZZ1 169 aaKnown RBP4.61□□□□□ -1.67
HMGB3P24-201ENST00000433260 RIMS4Q9H426 269 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P24-201ENST00000433260 ZNF702PQ9H963 129 aa4.61□□□□□ -1.67
HMGB3P24-201ENST00000433260 RAB18Q9NP72 206 aa4.61□□□□□ -1.67
HMGB3P24-201ENST00000433260 RAB9BQ9NP90 201 aa4.61□□□□□ -1.67
HMGB3P24-201ENST00000433260 OR1A1Q9P1Q5 309 aa4.61□□□□□ -1.67
HMGB3P24-201ENST00000433260 SLC23A1Q9UHI7 598 aa4.61□□□□□ -1.67
HMGB3P24-201ENST00000433260 MMP24Q9Y5R2 645 aa4.61□□□□□ -1.67
HMGB3P24-201ENST00000433260 FBN1P35555 2871 aaKnown RBP4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 IGKV1D-8A0A087WSZ0 117 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 LINC01548A6NM66 108 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 FAM90A9PA6NNJ1 464 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 OOSP1A8MZH6 123 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 MFNGO00587 321 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 BET1O15155 118 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 RGS11O94810 467 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 PTHLHP12272 177 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 HIST1H1DP16402 221 aaKnown RBP4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 PROK1P58294 105 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 RPL11P62913 178 aaKnown RBP4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 HLA-DRB3P79483 266 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 ZNF816Q0VGE8 651 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 TIMM50Q3ZCQ8 353 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 RPL39P5Q59GN2 51 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 IGSF11Q5DX21 431 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 GPR107Q5VW38 600 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 ZNF880Q6PDB4 577 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 GLDNQ6ZMI3 551 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 CENPVQ7Z7K6 275 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 THNSL2Q86YJ6 484 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 TGIF2LXQ8IUE1 241 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 ODF3L1Q8IXM7 274 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 KLHDC1Q8N7A1 406 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 OR2AK2Q8NG84 335 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 OR13F1Q8NGS4 319 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 ST6GALNAC6Q969X2 333 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 RITA1Q96K30 269 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 RBM14Q96PK6 669 aaKnown RBP4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 ABHD14AQ9BUJ0 271 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 PARP12Q9H0J9 701 aaKnown RBP4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 C11orf54Q9H0W9 315 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 C12orf4Q9NQ89 552 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 LINC00527Q9UJ94 153 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 JPT1Q9UK76 154 aa4.6□□□□□ -1.67
HMGB3P24-201ENST00000433260 SAA2-SAA4A0A096LPE2 208 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 TRBV6-6A0A0A6YYG2 114 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 IGKV1-6A0A0C4DH72 117 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 MEIS3P1A6NDR6 274 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 TMEM235A6NFC5 223 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 TRIM64CA6NLI5 447 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 FABP7O15540 132 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 OR2F2O95006 317 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 AMY1AP04745 511 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 AMY2AP04746 511 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 FCGR3AP08637 254 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 OR8U9P0C7N5 309 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 SAA2P0DJI9 122 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 SMIM18P0DKX4 95 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 CD28P10747 220 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 VDAC2P45880 294 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 F2RL1P55085 397 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 LINC00205P59089 165 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 GNG2P59768 71 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 HERPUD1Q15011 391 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 ZNF260Q3ZCT1 412 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 Q3ZCU0 254 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 HACD4Q5VWC8 232 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 FOXB2Q5VYV0 432 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 GPR141Q7Z602 305 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 ZNF554Q86TJ5 538 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 CROCCP3Q8IVE0 287 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 OR8H3Q8N146 312 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 SAMD12Q8N8I0 201 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 C8orf31Q8N9H6 132 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 DRAXINQ8NBI3 349 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 OR2T10Q8NGZ9 312 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 OR8U1Q8NH10 309 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 OR10J5Q8NHC4 309 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 SGMS2Q8NHU3 365 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 NUDCD2Q8WVJ2 157 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 S100A16Q96FQ6 103 aaKnown RBP4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 AKR1E2Q96JD6 320 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 S1PR3Q99500 378 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 CITED1Q99966 193 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 RASL11BQ9BPW5 248 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 MRPL20Q9BYC9 149 aaKnown RBP4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 MRPS26Q9BYN8 205 aaKnown RBP4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 DIABLOQ9NR28 239 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 SERTAD4Q9NUC0 356 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 RHBDL2Q9NX52 303 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 RDH8Q9NYR8 311 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 COMMD3Q9UBI1 195 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 MGAT4AQ9UM21 535 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 SPATA2Q9UM82 520 aa4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 RBM7Q9Y580 266 aaKnown RBP4.59□□□□□ -1.67
HMGB3P24-201ENST00000433260 TET2Q6N021 2002 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P24-201ENST00000433260 A0A1W2PRX2 142 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms