RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 GBGT1Q8N5D6 347 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 LIPHQ8WWY8 451 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 LPAR5Q9H1C0 372 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 Q9N2K0 584 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 SLC39A9Q9NUM3 307 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 RNF150Q9ULK6 438 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 PRSS47A8MTI9 375 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 LRRC75AQ8NAA5 344 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 LHX4Q969G2 390 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 RNF166Q96A37 237 aaPredicted RBP13.72□□□□□ -0.21
PKP4-205ENST00000426248 ANKRD11Q6UB99 2663 aaPredicted RBP13.72□□□□□ -0.21
PKP4-205ENST00000426248 LYL1P12980 280 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 MAS1LP35410 378 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 FAM166AQ6J272 317 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 LYPD6BQ8NI32 183 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 B3GAT1Q9P2W7 334 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 PTPRQQ9UMZ3 2332 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 WIPF3A6NGB9 483 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 LRRC3CA6NJW4 275 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 NXPH2O95156 264 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 RPL19P84098 196 aaKnown RBP13.71□□□□□ -0.21
PKP4-205ENST00000426248 CPT1CQ8TCG5 803 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 ZNF703Q9H7S9 590 aaPredicted RBP13.71□□□□□ -0.21
PKP4-205ENST00000426248 NHLH1Q02575 133 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 ZP4Q12836 540 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 ARL6IP1Q15041 203 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 ZNF506Q5JVG8 444 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 ZNF519Q8TB69 540 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 ZCCHC14Q8WYQ9 949 aaKnown RBP13.71□□□□□ -0.21
PKP4-205ENST00000426248 KCNK17Q96T54 332 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 SLC2A9Q9NRM0 540 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 OSGIN2Q9Y236 505 aa13.71□□□□□ -0.21
PKP4-205ENST00000426248 USF3Q68DE3 2245 aa13.71□□□□□ -0.22
PKP4-205ENST00000426248 ZNF121P58317 390 aaPredicted RBP13.71□□□□□ -0.22
PKP4-205ENST00000426248 PCBD1P61457 104 aa13.71□□□□□ -0.22
PKP4-205ENST00000426248 TDRG1Q3Y452 100 aa13.71□□□□□ -0.22
PKP4-205ENST00000426248 ZNF738Q8NE65 137 aa13.71□□□□□ -0.22
PKP4-205ENST00000426248 CLDND2Q8NHS1 167 aa13.71□□□□□ -0.22
PKP4-205ENST00000426248 BCL2P10415 239 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 IL13RA2Q14627 380 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 PRSS8Q16651 343 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 UNQ5815/PRO19632Q6UWF5 114 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 RNF144BQ7Z419 303 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 IGLV1-36A0A0B4J1U3 117 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 M0R135 149 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 C1orf100Q5SVJ3 147 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 LDLRAD2Q5SZI1 272 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 CISD2Q8N5K1 135 aaKnown RBP13.7□□□□□ -0.22
PKP4-205ENST00000426248 OR11L1Q8NGX0 322 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 ZNF799Q96GE5 643 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 YPEL4Q96NS1 127 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 RSG1Q9BU20 258 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 PLEKHF2Q9H8W4 249 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 ZNF286AQ9HBT8 521 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 GPR84Q9NQS5 396 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 TLN1Q9Y490 2541 aaKnown RBP13.7□□□□□ -0.22
PKP4-205ENST00000426248 PMCHP20382 165 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 C20orf196Q8IYI0 205 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 SIGLECL1Q8N7X8 197 aa13.7□□□□□ -0.22
PKP4-205ENST00000426248 F6UZH7 168 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 OR7C1O76099 320 aaPredicted RBP13.69□□□□□ -0.22
PKP4-205ENST00000426248 WT1P19544 449 aaPredicted RBP13.69□□□□□ -0.22
PKP4-205ENST00000426248 TMEM267Q0VDI3 215 aaPredicted RBP13.69□□□□□ -0.22
PKP4-205ENST00000426248 STARD4Q96DR4 205 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 CTDSP1Q9GZU7 261 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 TRBV24-1A0A075B6N3 115 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 ZNF816-ZNF321PA0A0X1KG74 233 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 FCGR2AP12318 317 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 CCL2P13500 99 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 ZNF32P17041 273 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 IL24Q13007 206 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 PBOV1Q9GZY1 135 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 NAT8Q9UHE5 227 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 IGLV3-32A0A0A0MS00 114 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 LOC102725191A0A1B0GVB3 256 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 KLF3P57682 345 aaPredicted RBP13.69□□□□□ -0.22
PKP4-205ENST00000426248 DTX1Q86Y01 620 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 PLPPR2Q96GM1 343 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 NAA60Q9H7X0 242 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 USP34Q70CQ2 3546 aa13.69□□□□□ -0.22
PKP4-205ENST00000426248 NKX2-6A6NCS4 301 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 ITGB1BP1O14713 200 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 NTF3P20783 257 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 C1orf185Q5T7R7 199 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 SPSB3Q6PJ21 355 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 ATOH7Q8N100 152 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 PIGCQ92535 297 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 GPHA2Q96T91 129 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 SCRT1Q9BWW7 348 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 KIAA2026Q5HYC2 2103 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 HSPB2A8KAH6 182 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 CCL25O15444 150 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 RBX1P62877 108 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 HSPB2Q16082 182 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 MRPL21Q7Z2W9 205 aaKnown RBP13.68□□□□□ -0.22
PKP4-205ENST00000426248 SPIN2AQ99865 258 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 SPIN2BQ9BPZ2 258 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 CDH20Q9HBT6 801 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 MALLQ13021 153 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 FBXL14Q8N1E6 418 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms