RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 BORCS7-ASMTA0A0B4J1R7 106 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 KBTBD11-OT1A0A1B0GTJ5 212 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 NDUFB3O43676 98 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 GPR137BO60478 399 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 GOSR1O95249 250 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 MBPP02686 304 aaPredicted RBP7.87□□□□□ -1.15
HMGB4-201ENST00000425537 GYPAP02724 150 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 ZNF16P17020 682 aaPredicted RBP7.87□□□□□ -1.15
HMGB4-201ENST00000425537 RPL12P30050 165 aaKnown RBP7.87□□□□□ -1.15
HMGB4-201ENST00000425537 PPP1CCP36873 323 aaKnown RBP7.87□□□□□ -1.15
HMGB4-201ENST00000425537 GPR12P47775 334 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 AKR1C2P52895 323 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 Q3ZCU0 254 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 FOXRED2Q8IWF2 684 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 ZNRF1Q8ND25 227 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 DEFB108BQ8NET1 73 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 OR52L2PQ8NGH6 319 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 OR4D5Q8NGN0 318 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 STOML3Q8TAV4 291 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 ST8SIA2Q92186 375 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 CCL13Q99616 98 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 TMEM204Q9BSN7 226 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 RAB1BQ9H0U4 201 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 SLC25A32Q9H2D1 315 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 CLN8Q9UBY8 286 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 GAB2Q9UQC2 676 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 PRELID3BQ9Y3B1 194 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 LINC00312Q9Y6C7 94 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 POLEQ07864 2286 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 PRR14LQ5THK1 2151 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 DYSFO75923 2080 aa7.87□□□□□ -1.15
HMGB4-201ENST00000425537 A0A1W2PPH5 198 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 LINC00862A6NCI5 91 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 MPTX1A8MV57 137 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 GPR37O15354 613 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 TMPRSS2O15393 492 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 ADAM20O43506 726 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 TNFSF12O43508 249 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 MED6O75586 246 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 JTBO76095 146 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 SCAF4O95104 1147 aaKnown RBP7.86□□□□□ -1.15
HMGB4-201ENST00000425537 SPDEFO95238 335 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 LY86O95711 162 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 CLDN1O95832 211 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 NDUFB7P17568 137 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 SSTR5P35346 364 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 ARHGDIBP52566 201 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 SNTB1Q13884 538 aaKnown RBP7.86□□□□□ -1.15
HMGB4-201ENST00000425537 SWI5Q1ZZU3 235 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 MORN2Q502X0 79 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 SPRNQ5BIV9 151 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 NMSQ5H8A3 153 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 PDZD9Q8IXQ8 264 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 LHFPL5Q8TAF8 219 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 NEU4Q8WWR8 484 aaPredicted RBP7.86□□□□□ -1.15
HMGB4-201ENST00000425537 CCL17Q92583 94 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 ADTRPQ96IZ2 230 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 LINC00574Q9H8X3 128 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 IDI2-AS1Q9NZ38 188 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 OR5AC2Q9NZP5 309 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 KAAG1Q9UBP8 84 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 SLC25A10Q9UBX3 287 aaPredicted RBP7.86□□□□□ -1.15
HMGB4-201ENST00000425537 PSG11Q9UQ72 335 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 CADP27708 2225 aa7.86□□□□□ -1.15
HMGB4-201ENST00000425537 FAM90A26D6RGX4 464 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 H0YIZ8 118 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 GAPDHP04406 335 aaKnown RBP7.85□□□□□ -1.15
HMGB4-201ENST00000425537 CGB3P0DN86 165 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 CGB7P0DN87 165 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 COL8A1P27658 744 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 LPAR6P43657 344 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 RPL23AP62750 156 aaKnown RBP7.85□□□□□ -1.15
HMGB4-201ENST00000425537 MRPS11P82912 194 aaKnown RBP7.85□□□□□ -1.15
HMGB4-201ENST00000425537 MST1LQ2TV78 715 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 C5orf24Q7Z6I8 188 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 BAP18Q8IXM2 172 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 SLC7A5P1Q8MH63 180 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 TPRX1Q8N7U7 411 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 RFESDQ8TAC1 157 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 UBALD1Q8TB05 177 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 TCTEX1D2Q8WW35 142 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 TIMD4Q96H15 378 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 RAB40CQ96S21 281 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 CBLN4Q9NTU7 201 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 GFOD1Q9NXC2 390 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 COA4Q9NYJ1 87 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 PFDN2Q9UHV9 154 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 MMP24Q9Y5R2 645 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 SESN1Q9Y6P5 492 aa7.85□□□□□ -1.15
HMGB4-201ENST00000425537 TANC2Q9HCD6 1990 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 TENM4Q6N022 2769 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 TRBV23-1A0A0A0MS06 115 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 FAM90A9PA6NNJ1 464 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 DEFB108AA8MXU0 73 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 RAB29O14966 203 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 RBFOX2O43251 390 aaKnown RBP eCLIP7.84□□□□□ -1.15
HMGB4-201ENST00000425537 CFDP00746 253 aaPredicted RBP7.84□□□□□ -1.15
HMGB4-201ENST00000425537 TFF1P04155 84 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 HKR1P10072 659 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 DAOP14920 347 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms