RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 ST8SIA5O15466 376 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 PITX3O75364 302 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 CGAP01215 116 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 H2AFB1P0C5Y9 115 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 HMGN3Q15651 99 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 SPANXN5Q5MJ07 72 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 SHEQ5VZ18 495 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 NINJ1Q92982 152 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 C5orf30Q96GV9 206 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 MBNL3Q9NUK0 354 aaKnown RBP9.7□□□□□ -0.86
UBR4-207ENST00000425413 POLEQ07864 2286 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 RBMXL2O75526 392 aaKnown RBP9.7□□□□□ -0.86
UBR4-207ENST00000425413 FAM27E3Q08E93 113 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 HAGHQ16775 308 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 C22orf34Q6ZV56 151 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 STX12Q86Y82 276 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 CD177Q8N6Q3 437 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 RSG1Q9BU20 258 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 BIN3Q9NQY0 253 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 SMCO4Q9NRQ5 59 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 PSG11Q9UQ72 335 aa9.7□□□□□ -0.86
UBR4-207ENST00000425413 CHD3Q12873 2000 aaKnown RBP9.7□□□□□ -0.86
UBR4-207ENST00000425413 SELLP14151 372 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 ARL16Q0P5N6 197 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 AWAT1Q58HT5 328 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 FGFRL1Q8N441 504 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 TCTEX1D2Q8WW35 142 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 C12orf57Q99622 126 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 LIN7CQ9NUP9 197 aaKnown RBP9.69□□□□□ -0.86
UBR4-207ENST00000425413 WIPI2Q9Y4P8 454 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 SLC25A15Q9Y619 301 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 A0A1B0GU03 582 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 K7N7A8 449 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 ATXN7O15265 892 aaPredicted RBP9.69□□□□□ -0.86
UBR4-207ENST00000425413 SYNGR2O43760 224 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 FBP1P09467 338 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 RPL23AP62750 156 aaKnown RBP9.69□□□□□ -0.86
UBR4-207ENST00000425413 SMIM21Q3B7S5 101 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 OR8G2PQ6IF36 304 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 MOGAT3Q86VF5 341 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 ZNRF1Q8ND25 227 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 C1orf162Q8NEQ5 155 aaPredicted RBP9.69□□□□□ -0.86
UBR4-207ENST00000425413 DEFB108BQ8NET1 73 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 SNIP1Q8TAD8 396 aaKnown RBP9.69□□□□□ -0.86
UBR4-207ENST00000425413 SFT2D1Q8WV19 159 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 HES4Q9HCC6 221 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 KCNJ16Q9NPI9 418 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 PSENENQ9NZ42 101 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 KPTNQ9Y664 436 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 TPRP12270 2363 aaKnown RBP9.69□□□□□ -0.86
UBR4-207ENST00000425413 PTPRBP23467 1997 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 C17orf98A8MV24 154 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 FAM157AC9JC47 383 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 IGLV1-44P01699 117 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 EDDM3BP56851 147 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 P2RY6Q15077 328 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 Q3ZCU0 254 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 BEND4Q6ZU67 534 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 RBMXL3Q8N7X1 1067 aaKnown RBP9.69□□□□□ -0.86
UBR4-207ENST00000425413 OR2V2Q96R30 315 aa9.69□□□□□ -0.86
UBR4-207ENST00000425413 IGF2RP11717 2491 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 DUXBA0A1W2PPF3 345 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 CLEC18AA5D8T8 446 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 ZNF98A6NK75 572 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 COLCA2A8K830 154 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 KIAA1324LA8MWY0 1029 aaPredicted RBP9.68□□□□□ -0.86
UBR4-207ENST00000425413 UMAD1C9J7I0 102 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 CEACAM4O75871 244 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 S1PR2O95136 353 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 ARG1P05089 322 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 PRDX2P32119 198 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 SNRPEP62304 92 aaKnown RBP9.68□□□□□ -0.86
UBR4-207ENST00000425413 TLE1Q04724 770 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 CLEC18CQ8NCF0 446 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 LEAP2Q969E1 77 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 IL22RA2Q969J5 263 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 C7orf77A4D0Y5 90 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 MBD3L4A6NDZ8 208 aaPredicted RBP9.68□□□□□ -0.86
UBR4-207ENST00000425413 MBD3L3A6NE82 208 aaPredicted RBP9.68□□□□□ -0.86
UBR4-207ENST00000425413 MBD3L5A6NJ08 208 aaPredicted RBP9.68□□□□□ -0.86
UBR4-207ENST00000425413 CLDN1O95832 211 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 CRYAAP02489 173 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 CEACAM1P13688 526 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 HOXB1P14653 301 aaPredicted RBP9.68□□□□□ -0.86
UBR4-207ENST00000425413 KITLGP21583 273 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 AKR1C8PQ5T2L2 129 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 MBD3L2Q8NHZ7 208 aaPredicted RBP9.68□□□□□ -0.86
UBR4-207ENST00000425413 MUCL1Q96DR8 90 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 PUS1Q9Y606 427 aaKnown RBP eCLIP9.68□□□□□ -0.86
UBR4-207ENST00000425413 RELNP78509 3460 aa9.68□□□□□ -0.86
UBR4-207ENST00000425413 A0A1W2PPH5 198 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 OOEPA6NGQ2 149 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 NPIPB11E5RHQ5 1161 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 SSX9Q7RTT3 188 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 LILRB2Q8N423 598 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 LYPD6BQ8NI32 183 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 ATP5SQ99766 215 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 GNG12Q9UBI6 72 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 CLN8Q9UBY8 286 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 STRAPQ9Y3F4 350 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms