RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 SLC22A1O15245 554 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 CDK1P06493 297 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 CD37P11049 281 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 HTR2CP28335 458 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 INSL3P51460 131 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 GNB1P62873 340 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 QRFPP83859 136 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 NDPQ00604 133 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 ZNF616Q08AN1 781 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 C19orf54Q5BKX5 351 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 LIN54Q6MZP7 749 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 FAM131AQ6UXB0 335 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 MOB1BQ7L9L4 216 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 IL1F10Q8WWZ1 152 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 TMED9Q9BVK6 235 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 KCNK15Q9H427 330 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 PIPOXQ9P0Z9 390 aa13.78□□□□□ -0.2
GPC1-203ENST00000425056 ZNF256Q9Y2P7 627 aaPredicted RBP13.78□□□□□ -0.2
GPC1-203ENST00000425056 LSM2Q9Y333 95 aaKnown RBP13.78□□□□□ -0.2
GPC1-203ENST00000425056 RAB29O14966 203 aa13.77□□□□□ -0.21
GPC1-203ENST00000425056 ST8SIA5O15466 376 aa13.77□□□□□ -0.21
GPC1-203ENST00000425056 RAB9AP51151 201 aa13.77□□□□□ -0.21
GPC1-203ENST00000425056 OR1N2Q8NGR9 330 aa13.77□□□□□ -0.21
GPC1-203ENST00000425056 SLC23A1Q9UHI7 598 aa13.77□□□□□ -0.21
GPC1-203ENST00000425056 FBXO7Q9Y3I1 522 aa13.77□□□□□ -0.21
GPC1-203ENST00000425056 U3KQK5 164 aa13.77□□□□□ -0.21
GPC1-203ENST00000425056 A0A0A6YYD4 124 aa13.76□□□□□ -0.21
GPC1-203ENST00000425056 TRBV6-6A0A0A6YYG2 114 aa13.76□□□□□ -0.21
GPC1-203ENST00000425056 OR5H14A6NHG9 310 aa13.76□□□□□ -0.21
GPC1-203ENST00000425056 ITGB1BP1O14713 200 aa13.76□□□□□ -0.21
GPC1-203ENST00000425056 BPNT1O95861 308 aa13.76□□□□□ -0.21
GPC1-203ENST00000425056 UCHL1P09936 223 aa13.76□□□□□ -0.21
GPC1-203ENST00000425056 SRMP19623 302 aa13.76□□□□□ -0.21
GPC1-203ENST00000425056 HSPA13P48723 471 aa13.76□□□□□ -0.21
GPC1-203ENST00000425056 SPHARQ15513 63 aa13.76□□□□□ -0.21
GPC1-203ENST00000425056 HSD17B12Q53GQ0 312 aa13.76□□□□□ -0.21
GPC1-203ENST00000425056 ZNF660Q6AZW8 331 aaPredicted RBP13.76□□□□□ -0.21
GPC1-203ENST00000425056 OR6M1Q8NGM8 313 aa13.76□□□□□ -0.21
GPC1-203ENST00000425056 OR5B12Q96R08 314 aa13.76□□□□□ -0.21
GPC1-203ENST00000425056 PARP12Q9H0J9 701 aaKnown RBP13.76□□□□□ -0.21
GPC1-203ENST00000425056 CHMP1AQ9HD42 196 aaPredicted RBP13.76□□□□□ -0.21
GPC1-203ENST00000425056 SORL1Q92673 2214 aa13.76□□□□□ -0.21
GPC1-203ENST00000425056 STAB2Q8WWQ8 2551 aa13.76□□□□□ -0.21
GPC1-203ENST00000425056 RRHO14718 337 aa13.75□□□□□ -0.21
GPC1-203ENST00000425056 SOX15O60248 233 aa13.75□□□□□ -0.21
GPC1-203ENST00000425056 CT45A6P0DMU7 189 aa13.75□□□□□ -0.21
GPC1-203ENST00000425056 CT45A5P0DMU8 189 aa13.75□□□□□ -0.21
GPC1-203ENST00000425056 CT45A7P0DMV0 189 aa13.75□□□□□ -0.21
GPC1-203ENST00000425056 ECSCRQ19T08 205 aa13.75□□□□□ -0.21
GPC1-203ENST00000425056 RPL39P5Q59GN2 51 aa13.75□□□□□ -0.21
GPC1-203ENST00000425056 CEACAM19Q7Z692 300 aa13.75□□□□□ -0.21
GPC1-203ENST00000425056 TCTEX1D1Q8N7M0 179 aa13.75□□□□□ -0.21
GPC1-203ENST00000425056 AGMATQ9BSE5 352 aa13.75□□□□□ -0.21
GPC1-203ENST00000425056 LPAR5Q9H1C0 372 aa13.75□□□□□ -0.21
GPC1-203ENST00000425056 GHITMQ9H3K2 345 aa13.75□□□□□ -0.21
GPC1-203ENST00000425056 RIMS4Q9H426 269 aaPredicted RBP13.75□□□□□ -0.21
GPC1-203ENST00000425056 FBXL15Q9H469 300 aa13.75□□□□□ -0.21
GPC1-203ENST00000425056 PLEKHJ1Q9NW61 149 aa13.75□□□□□ -0.21
GPC1-203ENST00000425056 FOXA2Q9Y261 457 aaPredicted RBP13.75□□□□□ -0.21
GPC1-203ENST00000425056 RYR3Q15413 4870 aa13.74□□□□□ -0.21
GPC1-203ENST00000425056 A0A1W2PN81 502 aa13.74□□□□□ -0.21
GPC1-203ENST00000425056 H0YJW9 148 aa13.74□□□□□ -0.21
GPC1-203ENST00000425056 MC5RP33032 325 aa13.74□□□□□ -0.21
GPC1-203ENST00000425056 CHRNA7P36544 502 aa13.74□□□□□ -0.21
GPC1-203ENST00000425056 CX3CL1P78423 397 aa13.74□□□□□ -0.21
GPC1-203ENST00000425056 HLA-DRB3P79483 266 aa13.74□□□□□ -0.21
GPC1-203ENST00000425056 IZUMO2Q6UXV1 221 aa13.74□□□□□ -0.21
GPC1-203ENST00000425056 SETD6Q8TBK2 473 aa13.74□□□□□ -0.21
GPC1-203ENST00000425056 DCUN1D4Q92564 292 aa13.74□□□□□ -0.21
GPC1-203ENST00000425056 ISYNA1Q9NPH2 558 aa13.74□□□□□ -0.21
GPC1-203ENST00000425056 PTGES3LE9PB15 166 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 OVOL1O14753 267 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 RBBP9O75884 186 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 AQP4P55087 323 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 IRF3Q14653 427 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 MED22Q15528 200 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 CD200R1LQ6Q8B3 271 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 GLDNQ6ZMI3 551 aaPredicted RBP13.73□□□□□ -0.21
GPC1-203ENST00000425056 ZNF429Q86V71 674 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 FAM89BQ8N5H3 189 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 OR5AN1Q8NGI8 311 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 EDARADDQ8WWZ3 215 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 UFD1Q92890 307 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 ABHD14BQ96IU4 210 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 GFI1Q99684 422 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 HDHD3Q9BSH5 251 aaPredicted RBP13.73□□□□□ -0.21
GPC1-203ENST00000425056 URM1Q9BTM9 101 aaKnown RBP13.73□□□□□ -0.21
GPC1-203ENST00000425056 TOLLIPQ9H0E2 274 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 AK3Q9UIJ7 227 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 MGAT4AQ9UM21 535 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 WASHC3Q9Y3C0 194 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 NUBP2Q9Y5Y2 271 aa13.73□□□□□ -0.21
GPC1-203ENST00000425056 FOXI3A8MTJ6 420 aaPredicted RBP13.72□□□□□ -0.21
GPC1-203ENST00000425056 SLC17A2O00624 439 aa13.72□□□□□ -0.21
GPC1-203ENST00000425056 SOCS1O15524 211 aa13.72□□□□□ -0.21
GPC1-203ENST00000425056 LGALS1P09382 135 aaKnown RBP13.72□□□□□ -0.21
GPC1-203ENST00000425056 EGR2P11161 476 aaPredicted RBP13.72□□□□□ -0.21
GPC1-203ENST00000425056 ZBTB25P24278 435 aa13.72□□□□□ -0.21
GPC1-203ENST00000425056 PLGLAQ15195 96 aa13.72□□□□□ -0.21
GPC1-203ENST00000425056 LIPKQ5VXJ0 399 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms