RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 CTDSP2O14595 271 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 RAB29O14966 203 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 TXNL1O43396 289 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 LANCL1O43813 399 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 CHST1O43916 411 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 DIRAS3O95661 229 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 HLA-DQB1P01920 261 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 SNRNP70P08621 437 aaKnown RBP11.89□□□□□ -0.51
TMEM248-204ENST00000424964 CTXN2P0C2S0 81 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 OR3A3P47888 321 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 RAG2P55895 527 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 ARPC4P59998 168 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 CNIH2Q6PI25 160 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 C12orf54Q6X4T0 127 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 HOGA1Q86XE5 327 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 THNSL2Q86YJ6 484 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 ODF3L1Q8IXM7 274 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 BEST4Q8NFU0 473 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 OR4F5Q8NH21 305 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 CFHR4Q92496 578 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 S1PR3Q99500 378 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 ANXA10Q9UJ72 324 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 ZNF221Q9UK13 617 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 RBM7Q9Y580 266 aaKnown RBP11.89□□□□□ -0.51
TMEM248-204ENST00000424964 COL6A5A8TX70 2615 aa11.89□□□□□ -0.51
TMEM248-204ENST00000424964 SAA2-SAA4A0A096LPE2 208 aa11.88□□□□□ -0.51
TMEM248-204ENST00000424964 NDUFA7O95182 113 aa11.88□□□□□ -0.51
TMEM248-204ENST00000424964 OR8U9P0C7N5 309 aa11.88□□□□□ -0.51
TMEM248-204ENST00000424964 SAA2P0DJI9 122 aaPredicted RBP11.88□□□□□ -0.51
TMEM248-204ENST00000424964 RELBQ01201 579 aa11.88□□□□□ -0.51
TMEM248-204ENST00000424964 HNF4GQ14541 408 aa11.88□□□□□ -0.51
TMEM248-204ENST00000424964 OR8U1Q8NH10 309 aa11.88□□□□□ -0.51
TMEM248-204ENST00000424964 DCUN1D5Q9BTE7 237 aa11.88□□□□□ -0.51
TMEM248-204ENST00000424964 C6orf62Q9GZU0 229 aaPredicted RBP11.88□□□□□ -0.51
TMEM248-204ENST00000424964 MIXL1Q9H2W2 232 aa11.88□□□□□ -0.51
TMEM248-204ENST00000424964 GHITMQ9H3K2 345 aa11.88□□□□□ -0.51
TMEM248-204ENST00000424964 FAM90A9PA6NNJ1 464 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 J3QRK9 145 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 ZNF701M0R085 212 aaPredicted RBP11.87□□□□□ -0.51
TMEM248-204ENST00000424964 IGKV1D-33P01593 117 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 IGKV1-33P01594 117 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 TMEM11P17152 192 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 MDKP21741 143 aaPredicted RBP11.87□□□□□ -0.51
TMEM248-204ENST00000424964 GPR12P47775 334 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 FBLN7Q53RD9 439 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 AWAT1Q58HT5 328 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 RPL39P5Q59GN2 51 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 Q6ZSV7 163 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 ZNF833PQ6ZTB9 187 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 C16orf82Q7Z2V1 217 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 LAX1Q8IWV1 398 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 H1FOOQ8IZA3 346 aaPredicted RBP11.87□□□□□ -0.51
TMEM248-204ENST00000424964 OR4C13Q8NGP0 309 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 MCFD2Q8NI22 146 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 AKR1E2Q96JD6 320 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 RBM14Q96PK6 669 aaKnown RBP11.87□□□□□ -0.51
TMEM248-204ENST00000424964 AGMATQ9BSE5 352 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 SLC25A33Q9BSK2 321 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 MRPL20Q9BYC9 149 aaKnown RBP11.87□□□□□ -0.51
TMEM248-204ENST00000424964 NPFFR1Q9GZQ6 430 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 SLIRPQ9GZT3 109 aaKnown RBP11.87□□□□□ -0.51
TMEM248-204ENST00000424964 TOLLIPQ9H0E2 274 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 BEX1Q9HBH7 125 aa11.87□□□□□ -0.51
TMEM248-204ENST00000424964 ZNF736B4DX44 427 aaPredicted RBP11.86□□□□□ -0.51
TMEM248-204ENST00000424964 OR2F2O95006 317 aa11.86□□□□□ -0.51
TMEM248-204ENST00000424964 NFYAP23511 347 aaPredicted RBP11.86□□□□□ -0.51
TMEM248-204ENST00000424964 CD1BP29016 333 aa11.86□□□□□ -0.51
TMEM248-204ENST00000424964 HABP2Q14520 560 aaPredicted RBP11.86□□□□□ -0.51
TMEM248-204ENST00000424964 FAM71F2Q6NXP2 309 aa11.86□□□□□ -0.51
TMEM248-204ENST00000424964 OR2T10Q8NGZ9 312 aa11.86□□□□□ -0.51
TMEM248-204ENST00000424964 DIRAS2Q96HU8 199 aa11.86□□□□□ -0.51
TMEM248-204ENST00000424964 NABP2Q9BQ15 211 aa11.86□□□□□ -0.51
TMEM248-204ENST00000424964 NECAP2Q9NVZ3 263 aa11.86□□□□□ -0.51
TMEM248-204ENST00000424964 NDUFA13Q9P0J0 144 aa11.86□□□□□ -0.51
TMEM248-204ENST00000424964 A0A1B0GUS0 222 aa11.85□□□□□ -0.51
TMEM248-204ENST00000424964 DPPA5A6NC42 116 aa11.85□□□□□ -0.51
TMEM248-204ENST00000424964 TSPAN9O75954 239 aa11.85□□□□□ -0.51
TMEM248-204ENST00000424964 COMPP49747 757 aaPredicted RBP11.85□□□□□ -0.51
TMEM248-204ENST00000424964 LSAMPQ13449 338 aa11.85□□□□□ -0.51
TMEM248-204ENST00000424964 RNASE12Q5GAN4 147 aaKnown RBP11.85□□□□□ -0.51
TMEM248-204ENST00000424964 OR5AP2Q8NGF4 316 aa11.85□□□□□ -0.51
TMEM248-204ENST00000424964 SPATA3Q8NHX4 192 aa11.85□□□□□ -0.51
TMEM248-204ENST00000424964 GPX8Q8TED1 209 aa11.85□□□□□ -0.51
TMEM248-204ENST00000424964 SNAPC3Q92966 411 aa11.85□□□□□ -0.51
TMEM248-204ENST00000424964 EAF1Q96JC9 268 aaPredicted RBP11.85□□□□□ -0.51
TMEM248-204ENST00000424964 ZNF251Q9BRH9 671 aa11.85□□□□□ -0.51
TMEM248-204ENST00000424964 PRSS22Q9GZN4 317 aa11.85□□□□□ -0.51
TMEM248-204ENST00000424964 OR2D2Q9H210 308 aa11.85□□□□□ -0.51
TMEM248-204ENST00000424964 RANBP3Q9H6Z4 567 aaPredicted RBP11.85□□□□□ -0.51
TMEM248-204ENST00000424964 SCPEP1Q9HB40 452 aa11.85□□□□□ -0.51
TMEM248-204ENST00000424964 CLPSL1A2RUU4 121 aa11.84□□□□□ -0.51
TMEM248-204ENST00000424964 M0R1X1 148 aa11.84□□□□□ -0.51
TMEM248-204ENST00000424964 SULT1C2O00338 296 aa11.84□□□□□ -0.51
TMEM248-204ENST00000424964 MOSP00540 346 aa11.84□□□□□ -0.51
TMEM248-204ENST00000424964 LUMP51884 338 aaPredicted RBP11.84□□□□□ -0.51
TMEM248-204ENST00000424964 EBI3Q14213 229 aa11.84□□□□□ -0.51
TMEM248-204ENST00000424964 CDK10Q15131 360 aa11.84□□□□□ -0.51
TMEM248-204ENST00000424964 ARSJQ5FYB0 599 aaPredicted RBP11.84□□□□□ -0.51
TMEM248-204ENST00000424964 GLDNQ6ZMI3 551 aaPredicted RBP11.84□□□□□ -0.51
TMEM248-204ENST00000424964 C3orf56Q8N813 242 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms