RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 CD28P10747 220 aa17.73■□□□□ 0.43
PTCHD3P2-201ENST00000424937 SCAND1P57086 179 aa17.73■□□□□ 0.43
PTCHD3P2-201ENST00000424937 CDNFQ49AH0 187 aa17.73■□□□□ 0.43
PTCHD3P2-201ENST00000424937 FAM71F2Q6NXP2 309 aa17.73■□□□□ 0.43
PTCHD3P2-201ENST00000424937 WIPF2Q8TF74 440 aaPredicted RBP17.73■□□□□ 0.43
PTCHD3P2-201ENST00000424937 ABHD14BQ96IU4 210 aa17.73■□□□□ 0.43
PTCHD3P2-201ENST00000424937 NABP2Q9BQ15 211 aa17.73■□□□□ 0.43
PTCHD3P2-201ENST00000424937 C11orf54Q9H0W9 315 aaPredicted RBP17.73■□□□□ 0.43
PTCHD3P2-201ENST00000424937 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.73■□□□□ 0.43
PTCHD3P2-201ENST00000424937 ITGB1BP1O14713 200 aa17.72■□□□□ 0.43
PTCHD3P2-201ENST00000424937 RAB29O14966 203 aa17.72■□□□□ 0.43
PTCHD3P2-201ENST00000424937 BET1O15155 118 aa17.72■□□□□ 0.43
PTCHD3P2-201ENST00000424937 RPL39P5Q59GN2 51 aa17.72■□□□□ 0.43
PTCHD3P2-201ENST00000424937 IGSF11Q5DX21 431 aa17.72■□□□□ 0.43
PTCHD3P2-201ENST00000424937 PHF21AQ96BD5 680 aa17.72■□□□□ 0.43
PTCHD3P2-201ENST00000424937 SLC25A38Q96DW6 304 aa17.72■□□□□ 0.43
PTCHD3P2-201ENST00000424937 S1PR3Q99500 378 aa17.72■□□□□ 0.43
PTCHD3P2-201ENST00000424937 CABLES2Q9BTV7 478 aa17.72■□□□□ 0.43
PTCHD3P2-201ENST00000424937 FUNDC2Q9BWH2 189 aa17.72■□□□□ 0.43
PTCHD3P2-201ENST00000424937 RDH8Q9NYR8 311 aa17.72■□□□□ 0.43
PTCHD3P2-201ENST00000424937 TMEM235A6NFC5 223 aa17.71■□□□□ 0.43
PTCHD3P2-201ENST00000424937 CSF1P09603 554 aa17.71■□□□□ 0.43
PTCHD3P2-201ENST00000424937 GSTT2P0CG29 244 aa17.71■□□□□ 0.43
PTCHD3P2-201ENST00000424937 GSTT2BP0CG30 244 aa17.71■□□□□ 0.43
PTCHD3P2-201ENST00000424937 SERPINB10P48595 397 aa17.71■□□□□ 0.43
PTCHD3P2-201ENST00000424937 HACD4Q5VWC8 232 aa17.71■□□□□ 0.43
PTCHD3P2-201ENST00000424937 CENPVQ7Z7K6 275 aaPredicted RBP17.71■□□□□ 0.43
PTCHD3P2-201ENST00000424937 NUDCD2Q8WVJ2 157 aa17.71■□□□□ 0.43
PTCHD3P2-201ENST00000424937 ZNF251Q9BRH9 671 aa17.71■□□□□ 0.43
PTCHD3P2-201ENST00000424937 AGMATQ9BSE5 352 aa17.71■□□□□ 0.43
PTCHD3P2-201ENST00000424937 MMP27Q9H306 513 aa17.71■□□□□ 0.43
PTCHD3P2-201ENST00000424937 GSTP1P09211 210 aaKnown RBP17.7■□□□□ 0.42
PTCHD3P2-201ENST00000424937 DTYMKP23919 212 aa17.7■□□□□ 0.42
PTCHD3P2-201ENST00000424937 RPS19P39019 145 aaKnown RBP17.7■□□□□ 0.42
PTCHD3P2-201ENST00000424937 GNG2P59768 71 aa17.7■□□□□ 0.42
PTCHD3P2-201ENST00000424937 CROCCP3Q8IVE0 287 aa17.7■□□□□ 0.42
PTCHD3P2-201ENST00000424937 Q8N9W7 124 aa17.7■□□□□ 0.42
PTCHD3P2-201ENST00000424937 OR5AU1Q8NGC0 362 aa17.7■□□□□ 0.42
PTCHD3P2-201ENST00000424937 OR13F1Q8NGS4 319 aa17.7■□□□□ 0.42
PTCHD3P2-201ENST00000424937 OR10J5Q8NHC4 309 aa17.7■□□□□ 0.42
PTCHD3P2-201ENST00000424937 LIN7CQ9NUP9 197 aaKnown RBP17.7■□□□□ 0.42
PTCHD3P2-201ENST00000424937 VWFP04275 2813 aa17.7■□□□□ 0.42
PTCHD3P2-201ENST00000424937 CMYA5Q8N3K9 4069 aa17.69■□□□□ 0.42
PTCHD3P2-201ENST00000424937 NCS1P62166 190 aa17.69■□□□□ 0.42
PTCHD3P2-201ENST00000424937 MMDQ15546 238 aa17.69■□□□□ 0.42
PTCHD3P2-201ENST00000424937 NSUN5P1Q3KNT7 163 aa17.69■□□□□ 0.42
PTCHD3P2-201ENST00000424937 ZNF260Q3ZCT1 412 aa17.69■□□□□ 0.42
PTCHD3P2-201ENST00000424937 FAM131AQ6UXB0 335 aa17.69■□□□□ 0.42
PTCHD3P2-201ENST00000424937 OR8H1Q8NGG4 311 aa17.69■□□□□ 0.42
PTCHD3P2-201ENST00000424937 FAM110DQ8TAY7 271 aaPredicted RBP17.69■□□□□ 0.42
PTCHD3P2-201ENST00000424937 CITED2Q99967 270 aaPredicted RBP17.69■□□□□ 0.42
PTCHD3P2-201ENST00000424937 PLSCR3Q9NRY6 295 aa17.69■□□□□ 0.42
PTCHD3P2-201ENST00000424937 RNF150Q9ULK6 438 aa17.69■□□□□ 0.42
PTCHD3P2-201ENST00000424937 SPATA2Q9UM82 520 aa17.69■□□□□ 0.42
PTCHD3P2-201ENST00000424937 IGKV1D-8A0A087WSZ0 117 aa17.68■□□□□ 0.42
PTCHD3P2-201ENST00000424937 TRBV6-7A0A0A0MS04 114 aa17.68■□□□□ 0.42
PTCHD3P2-201ENST00000424937 TMEM127O75204 238 aa17.68■□□□□ 0.42
PTCHD3P2-201ENST00000424937 GPR12P47775 334 aa17.68■□□□□ 0.42
PTCHD3P2-201ENST00000424937 F2RL1P55085 397 aa17.68■□□□□ 0.42
PTCHD3P2-201ENST00000424937 PITPNAQ00169 270 aa17.68■□□□□ 0.42
PTCHD3P2-201ENST00000424937 SRSF7Q16629 238 aaKnown RBP eCLIP17.68■□□□□ 0.42
PTCHD3P2-201ENST00000424937 PNLIPRP3Q17RR3 467 aa17.68■□□□□ 0.42
PTCHD3P2-201ENST00000424937 Q6ZS49 121 aa17.68■□□□□ 0.42
PTCHD3P2-201ENST00000424937 SLC35E3Q7Z769 313 aa17.68■□□□□ 0.42
PTCHD3P2-201ENST00000424937 RASL11BQ9BPW5 248 aa17.68■□□□□ 0.42
PTCHD3P2-201ENST00000424937 GINS4Q9BRT9 223 aa17.68■□□□□ 0.42
PTCHD3P2-201ENST00000424937 ST6GALNAC5Q9BVH7 336 aa17.68■□□□□ 0.42
PTCHD3P2-201ENST00000424937 GHITMQ9H3K2 345 aa17.68■□□□□ 0.42
PTCHD3P2-201ENST00000424937 ZNF221Q9UK13 617 aa17.68■□□□□ 0.42
PTCHD3P2-201ENST00000424937 TRAV18A0A075B6X5 111 aa17.67■□□□□ 0.42
PTCHD3P2-201ENST00000424937 DIRAS3O95661 229 aa17.67■□□□□ 0.42
PTCHD3P2-201ENST00000424937 IGHG2P01859 326 aa17.67■□□□□ 0.42
PTCHD3P2-201ENST00000424937 ACTBP60709 375 aa17.67■□□□□ 0.42
PTCHD3P2-201ENST00000424937 VBP1P61758 197 aa17.67■□□□□ 0.42
PTCHD3P2-201ENST00000424937 C10orf99Q6UWK7 81 aa17.67■□□□□ 0.42
PTCHD3P2-201ENST00000424937 GLDNQ6ZMI3 551 aaPredicted RBP17.67■□□□□ 0.42
PTCHD3P2-201ENST00000424937 NDUFA11Q86Y39 141 aa17.67■□□□□ 0.42
PTCHD3P2-201ENST00000424937 FAM71E2Q8N5Q1 922 aa17.67■□□□□ 0.42
PTCHD3P2-201ENST00000424937 NOL4LQ96MY1 436 aaPredicted RBP17.67■□□□□ 0.42
PTCHD3P2-201ENST00000424937 MRPS26Q9BYN8 205 aaKnown RBP17.67■□□□□ 0.42
PTCHD3P2-201ENST00000424937 TOLLIPQ9H0E2 274 aa17.67■□□□□ 0.42
PTCHD3P2-201ENST00000424937 ABCG5Q9H222 651 aa17.67■□□□□ 0.42
PTCHD3P2-201ENST00000424937 PSMB11A5LHX3 300 aa17.66■□□□□ 0.42
PTCHD3P2-201ENST00000424937 OR5H14A6NHG9 310 aa17.66■□□□□ 0.42
PTCHD3P2-201ENST00000424937 SSX5O60225 188 aa17.66■□□□□ 0.42
PTCHD3P2-201ENST00000424937 CT45A6P0DMU7 189 aa17.66■□□□□ 0.42
PTCHD3P2-201ENST00000424937 CT45A5P0DMU8 189 aa17.66■□□□□ 0.42
PTCHD3P2-201ENST00000424937 CT45A7P0DMV0 189 aa17.66■□□□□ 0.42
PTCHD3P2-201ENST00000424937 FOXRED2Q8IWF2 684 aa17.66■□□□□ 0.42
PTCHD3P2-201ENST00000424937 OR4X2Q8NGF9 303 aa17.66■□□□□ 0.42
PTCHD3P2-201ENST00000424937 OR2D2Q9H210 308 aa17.66■□□□□ 0.42
PTCHD3P2-201ENST00000424937 LINC00527Q9UJ94 153 aa17.66■□□□□ 0.42
PTCHD3P2-201ENST00000424937 A0A0A6YYH2 397 aa17.65■□□□□ 0.42
PTCHD3P2-201ENST00000424937 A0A1W2PRX2 142 aa17.65■□□□□ 0.42
PTCHD3P2-201ENST00000424937 A6NJ64 397 aa17.65■□□□□ 0.42
PTCHD3P2-201ENST00000424937 H0YJW9 148 aa17.65■□□□□ 0.42
PTCHD3P2-201ENST00000424937 CNTFRP26992 372 aa17.65■□□□□ 0.42
PTCHD3P2-201ENST00000424937 CHPT1Q8WUD6 406 aa17.65■□□□□ 0.42
PTCHD3P2-201ENST00000424937 SLC25A46Q96AG3 418 aa17.65■□□□□ 0.42
PTCHD3P2-201ENST00000424937 RITA1Q96K30 269 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms