RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 VSTM2BA6NLU5 285 aa9.63□□□□□ -0.87
SEC61A1-202ENST00000424880 TCN2P20062 427 aa9.63□□□□□ -0.87
SEC61A1-202ENST00000424880 ATP5G3P48201 142 aa9.63□□□□□ -0.87
SEC61A1-202ENST00000424880 BORCS8Q96FH0 119 aa9.63□□□□□ -0.87
SEC61A1-202ENST00000424880 OR6C1Q96RD1 312 aa9.63□□□□□ -0.87
SEC61A1-202ENST00000424880 USF3Q68DE3 2245 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 CLEC18AA5D8T8 446 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 M0R135 149 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 SYNGR4O95473 234 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 COMPP49747 757 aaPredicted RBP9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 DEFB119Q8N690 84 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 CLEC18CQ8NCF0 446 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 OR5AU1Q8NGC0 362 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 PIGCQ92535 297 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 ZNF799Q96GE5 643 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 SPIN2AQ99865 258 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 SPIN2BQ9BPZ2 258 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 KLRF1Q9NZS2 232 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 PXMP4Q9Y6I8 212 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 SLC22A20A6NK97 555 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 WNT2P09544 360 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 DUSP3P51452 185 aaPredicted RBP9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 ZP4Q12836 540 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 IGFBP7Q16270 282 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 LCN12Q6JVE5 192 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 KCNIP4Q6PIL6 250 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 OSR2Q8N2R0 312 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 DEFB123Q8N688 67 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 ZNF525Q8N782 197 aa9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 ZNF552Q9H707 407 aaPredicted RBP9.62□□□□□ -0.87
SEC61A1-202ENST00000424880 DIRC3C9JPN6 131 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 HOXB2P14652 356 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 PPP1CBP62140 327 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 BAXQ07812 192 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 SMRP1Q8NCR6 262 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 OR4C5Q8NGB2 326 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 ST6GALNAC6Q969X2 333 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 WDYHV1Q96HA8 205 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 REPIN1Q9BWE0 567 aaKnown RBP9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 COPS7AQ9UBW8 275 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 PPP1R3CQ9UQK1 317 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 LAMTOR2Q9Y2Q5 125 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 R4GN57 208 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 MUC3AQ02505 3323 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 IFNA1P01562 189 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 SERPINE2P07093 398 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 CRISP2P16562 243 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 OTX2P32243 289 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 GUCA1AP43080 201 aaPredicted RBP9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 MALLQ13021 153 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 MSMO1Q15800 293 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 MORN2Q502X0 79 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 TMEM92Q6UXU6 159 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 OR5D13Q8NGL4 314 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 MOB1AQ9H8S9 216 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 C11orf94C9JXX5 98 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 TRAF3IP2O43734 574 aaPredicted RBP9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 IER3P46695 156 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 HNRNPA3P51991 378 aaKnown RBP9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 TPPP2P59282 170 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 PSG4Q00888 419 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 LDLRAD2Q5SZI1 272 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 MBD3L1Q8WWY6 194 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 TMEM234Q8WY98 164 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 CORO2AQ92828 525 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 DDIT4LQ96D03 193 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 STARD4Q96DR4 205 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 MRGPRX1Q96LB2 322 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 TMEM56Q96MV1 263 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 GUCD1Q96NT3 240 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 TMEM56-RWDD3S4R434 201 aa9.61□□□□□ -0.87
SEC61A1-202ENST00000424880 IGHV3-64DA0A0J9YX35 117 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 DUXBA0A1W2PPF3 345 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 MYF5P13349 255 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 NTF3P20783 257 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 CCL1P22362 96 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 SUMO1P63165 101 aaKnown RBP9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 OR10G9Q8NGN4 311 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 OR10G7Q8NGN6 311 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 CSTL1Q9H114 145 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 SLC45A2Q9UMX9 530 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 TRAV38-1A0A0B4J264 116 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 TMEM238C9JI98 176 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 HYPMO75409 117 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 PRAMEF20Q5VT98 475 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 RCHY1Q96PM5 261 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 LOC400499M0QZD8 3231 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 DSPP15924 2871 aaKnown RBP9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 IGHV2-70DA0A0C4DH43 119 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 SYNGR2O43760 224 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 PGLYRP1O75594 196 aaPredicted RBP9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 CLDN1O95832 211 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 ESDP10768 282 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 RPS20P60866 119 aaKnown RBP9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 TFF3Q07654 80 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 SHBQ15464 509 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 ACSF3Q4G176 576 aaPredicted RBP9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 LOXL4Q96JB6 756 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 CDX2Q99626 313 aaPredicted RBP9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 WDR61Q9GZS3 305 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms