RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 ZNF439Q8NDP4 499 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 OR52B4Q8NGK2 314 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 NCOR1P1Q9H4R4 102 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 OPN4Q9UHM6 478 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 SCP2D1Q9UJQ7 156 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 MGAT4AQ9UM21 535 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 HILPDAQ9Y5L2 63 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 AUP1Q9Y679 476 aa10.94□□□□□ -0.66
PRPF39-202ENST00000424478 DIRAS3O95661 229 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 CD24P25063 80 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 PAX8Q06710 450 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 KRTAP1-1Q07627 177 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 MZT2BQ6NZ67 158 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 CENPSQ8N2Z9 138 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 GIMAP1Q8WWP7 306 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 MOB3AQ96BX8 217 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 C20orf85Q9H1P6 137 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 C5orf66Q9H5L9 145 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 LINC00574Q9H8X3 128 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 SAA2-SAA4A0A096LPE2 208 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 IGHV3-72A0A0B4J1Y9 119 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 SAA2P0DJI9 122 aaPredicted RBP10.93□□□□□ -0.66
PRPF39-202ENST00000424478 OR10X1Q8NGY0 326 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 OR51H1Q8NH63 302 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 PRRT1Q99946 306 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 DPAGT1Q9H3H5 408 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 A0A1W2PPH5 198 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 A8MV72 311 aaPredicted RBP10.93□□□□□ -0.66
PRPF39-202ENST00000424478 J3QR06 171 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 YPEL1O60688 119 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 TBPP20226 339 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 LUMP51884 338 aaPredicted RBP10.93□□□□□ -0.66
PRPF39-202ENST00000424478 SP6Q3SY56 376 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 ODF3L1Q8IXM7 274 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 PIP4P2Q8N4L2 257 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 ZFAND2BQ8WV99 257 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 YPEL2Q96QA6 119 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 PALMDQ9NP74 551 aa10.93□□□□□ -0.66
PRPF39-202ENST00000424478 ZNF107Q9UII5 783 aaPredicted RBP10.93□□□□□ -0.66
PRPF39-202ENST00000424478 CENPVL3A0A0U1RRI6 287 aa10.92□□□□□ -0.66
PRPF39-202ENST00000424478 CTXN2P0C2S0 81 aa10.92□□□□□ -0.66
PRPF39-202ENST00000424478 PRTN3P24158 256 aa10.92□□□□□ -0.66
PRPF39-202ENST00000424478 TRIM16LQ309B1 348 aa10.92□□□□□ -0.66
PRPF39-202ENST00000424478 DYNAPQ8N1N2 210 aa10.92□□□□□ -0.66
PRPF39-202ENST00000424478 DRAM1Q8N682 238 aa10.92□□□□□ -0.66
PRPF39-202ENST00000424478 RTBDNQ9BSG5 229 aaPredicted RBP10.92□□□□□ -0.66
PRPF39-202ENST00000424478 CLEC7AQ9BXN2 247 aa10.92□□□□□ -0.66
PRPF39-202ENST00000424478 NDUFB6O95139 128 aa10.92□□□□□ -0.66
PRPF39-202ENST00000424478 KLF17Q5JT82 389 aaPredicted RBP10.92□□□□□ -0.66
PRPF39-202ENST00000424478 SEC22CQ9BRL7 303 aa10.92□□□□□ -0.66
PRPF39-202ENST00000424478 SDHAF2Q9NX18 166 aa10.92□□□□□ -0.66
PRPF39-202ENST00000424478 KPTNQ9Y664 436 aa10.92□□□□□ -0.66
PRPF39-202ENST00000424478 M0R1W7 72 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 TOR1AO14656 332 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 VSIG10L2P0DP72 767 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 GPR12P47775 334 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 RAB13P51153 203 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 RPL30P62888 115 aaKnown RBP10.91□□□□□ -0.66
PRPF39-202ENST00000424478 RBMS2Q15434 407 aaKnown RBP10.91□□□□□ -0.66
PRPF39-202ENST00000424478 FBLN7Q53RD9 439 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 CYB5R2Q6BCY4 276 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 ZNF554Q86TJ5 538 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 OR4P4Q8NGL7 312 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 GSX1Q9H4S2 264 aaPredicted RBP10.91□□□□□ -0.66
PRPF39-202ENST00000424478 A0A0B4J293 547 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 MDFIC2A0A1B0GVS7 189 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 PEX14O75381 377 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 RPA2P15927 270 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 PIGPP57054 158 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 SSX2Q16385 188 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 LIN54Q6MZP7 749 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 SLC25A48Q6ZT89 311 aaKnown RBP10.91□□□□□ -0.66
PRPF39-202ENST00000424478 TMEM230Q96A57 120 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 POLR3KQ9Y2Y1 108 aaPredicted RBP10.91□□□□□ -0.66
PRPF39-202ENST00000424478 hCG_1809904A0A1W2PP81 198 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 A0A1W2PPE2 198 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 A0A1W2PR64 198 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 A0A1W2PRV1 198 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 M0R1X1 148 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 PLET1Q6UQ28 207 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 BCL6BQ8N143 479 aaPredicted RBP10.91□□□□□ -0.66
PRPF39-202ENST00000424478 OR9G1Q8NH87 305 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 SLC2A9Q9NRM0 540 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 SLC2A8Q9NY64 477 aa10.91□□□□□ -0.66
PRPF39-202ENST00000424478 TRAV20A0A0B4J274 112 aa10.9□□□□□ -0.66
PRPF39-202ENST00000424478 NAP1L6A6NFF2 107 aa10.9□□□□□ -0.66
PRPF39-202ENST00000424478 LINC00473A8K010 186 aa10.9□□□□□ -0.66
PRPF39-202ENST00000424478 GZMKP49863 264 aa10.9□□□□□ -0.66
PRPF39-202ENST00000424478 OXA1LQ15070 435 aa10.9□□□□□ -0.66
PRPF39-202ENST00000424478 SLC9A3R2Q15599 337 aa10.9□□□□□ -0.66
PRPF39-202ENST00000424478 YAE1D1Q9NRH1 226 aa10.9□□□□□ -0.66
PRPF39-202ENST00000424478 GPR132Q9UNW8 380 aa10.9□□□□□ -0.66
PRPF39-202ENST00000424478 IGLV1-47P01700 117 aa10.9□□□□□ -0.66
PRPF39-202ENST00000424478 VAMP1P23763 118 aa10.9□□□□□ -0.66
PRPF39-202ENST00000424478 SAA4P35542 130 aa10.9□□□□□ -0.66
PRPF39-202ENST00000424478 CASTOR1Q8WTX7 329 aa10.9□□□□□ -0.66
PRPF39-202ENST00000424478 C7orf50Q9BRJ6 194 aaKnown RBP10.9□□□□□ -0.66
PRPF39-202ENST00000424478 PLXNB1O43157 2135 aa10.9□□□□□ -0.66
PRPF39-202ENST00000424478 PTTG1O95997 202 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 H2AFB2P0C5Z0 115 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms