RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PEAR1Q5VY43 1037 aaPredicted RBP12.85□□□□□ -0.35
C9orf3-204ENST00000424143 KCNIP4Q6PIL6 250 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 DRAM1Q8N682 238 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 ZNF645Q8N7E2 425 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 OR2T10Q8NGZ9 312 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 RAB1CQ92928 201 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 TMEM18Q96B42 140 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 RTL8AQ9BWD3 113 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 PARLQ9H300 379 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 GP6Q9HCN6 339 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 B4GALT7Q9UBV7 327 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 KMT2EQ8IZD2 1858 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 CDH23Q9H251 3354 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 XKRY2A2RUG3 117 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 SLC33A1O00400 549 aaPredicted RBP12.84□□□□□ -0.35
C9orf3-204ENST00000424143 RAB29O14966 203 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 IGKV1D-33P01593 117 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 IGKV1-33P01594 117 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 PDZD11Q5EBL8 140 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 ACSM6Q6P461 480 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 MRPL52Q86TS9 123 aaKnown RBP12.84□□□□□ -0.35
C9orf3-204ENST00000424143 BATF2Q8N1L9 274 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 APH1AQ96BI3 265 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 KCNIP1Q9NZI2 227 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 PPP1R3CQ9UQK1 317 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 LRRC30A6NM36 301 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 ZNF891A8MT65 544 aaPredicted RBP12.84□□□□□ -0.35
C9orf3-204ENST00000424143 C17orf112F2Z3M2 114 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 HSPB6O14558 160 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 ATXN7O15265 892 aaPredicted RBP12.84□□□□□ -0.35
C9orf3-204ENST00000424143 MLNRO43193 412 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 PDE6DO43924 150 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 NGFP01138 241 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 FOXL1Q12952 345 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 IGFBP7Q16270 282 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 AARDQ4LEZ3 155 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 C4orf17Q53FE4 359 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 SLC23A3Q6PIS1 610 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 OR10G9Q8NGN4 311 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 OR10G7Q8NGN6 311 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 NANOS1Q8WY41 292 aaKnown RBP12.84□□□□□ -0.35
C9orf3-204ENST00000424143 RHOVQ96L33 236 aa12.84□□□□□ -0.35
C9orf3-204ENST00000424143 ZNF703Q9H7S9 590 aaPredicted RBP12.84□□□□□ -0.35
C9orf3-204ENST00000424143 UBE2L5PA0A1B0GUS4 154 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 PINLYPA6NC86 204 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 FAM90A9PA6NNJ1 464 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 C1QTNF9BB2RNN3 333 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 SH2D1BO14796 132 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 GYPAP02724 150 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 GZMHP20718 246 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 CCNOP22674 350 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 WNT5AP41221 380 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 CATR1Q13166 79 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 GABRA6Q16445 453 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 IZUMO4Q1ZYL8 232 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 ZNF66Q6ZN08 573 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 OR2M7Q8NG81 312 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 OR10P1Q8NGE3 313 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 ZPBPQ9BS86 351 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 TRAPPC2LQ9UL33 140 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 GAB2Q9UQC2 676 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 SDK2Q58EX2 2172 aa12.83□□□□□ -0.36
C9orf3-204ENST00000424143 TRAV9-1A0A075B6T8 112 aa12.82□□□□□ -0.36
C9orf3-204ENST00000424143 ZNF503-AS2A6NEH8 195 aa12.82□□□□□ -0.36
C9orf3-204ENST00000424143 TMEM210A6NLX4 147 aa12.82□□□□□ -0.36
C9orf3-204ENST00000424143 F6UZH7 168 aa12.82□□□□□ -0.36
C9orf3-204ENST00000424143 GDF9O60383 454 aa12.82□□□□□ -0.36
C9orf3-204ENST00000424143 CLDN14O95500 239 aa12.82□□□□□ -0.36
C9orf3-204ENST00000424143 CLDN1O95832 211 aa12.82□□□□□ -0.36
C9orf3-204ENST00000424143 OR2H2O95918 312 aa12.82□□□□□ -0.36
C9orf3-204ENST00000424143 ELLP55199 621 aaPredicted RBP12.82□□□□□ -0.36
C9orf3-204ENST00000424143 SPCS3P61009 180 aa12.82□□□□□ -0.36
C9orf3-204ENST00000424143 IQCJQ1A5X6 159 aa12.82□□□□□ -0.36
C9orf3-204ENST00000424143 BEND4Q6ZU67 534 aa12.82□□□□□ -0.36
C9orf3-204ENST00000424143 NUFIP2Q7Z417 695 aaKnown RBP12.82□□□□□ -0.36
C9orf3-204ENST00000424143 TMEM144Q7Z5S9 345 aa12.82□□□□□ -0.36
C9orf3-204ENST00000424143 TUSC5Q8IXB3 177 aa12.82□□□□□ -0.36
C9orf3-204ENST00000424143 ZNF664Q8N3J9 261 aa12.82□□□□□ -0.36
C9orf3-204ENST00000424143 MEGF10Q96KG7 1140 aa12.82□□□□□ -0.36
C9orf3-204ENST00000424143 ZNF488Q96MN9 340 aa12.82□□□□□ -0.36
C9orf3-204ENST00000424143 A0A096LPE4 126 aa12.81□□□□□ -0.36
C9orf3-204ENST00000424143 A0A1B0GV90 55 aa12.81□□□□□ -0.36
C9orf3-204ENST00000424143 A0A1W2PPZ6 126 aa12.81□□□□□ -0.36
C9orf3-204ENST00000424143 SLC10A1Q14973 349 aa12.81□□□□□ -0.36
C9orf3-204ENST00000424143 SLC35E4Q6ICL7 350 aa12.81□□□□□ -0.36
C9orf3-204ENST00000424143 ZNF709Q8N972 641 aa12.81□□□□□ -0.36
C9orf3-204ENST00000424143 IL1F10Q8WWZ1 152 aa12.81□□□□□ -0.36
C9orf3-204ENST00000424143 BCL2L2Q92843 193 aaPredicted RBP12.81□□□□□ -0.36
C9orf3-204ENST00000424143 TAAR6Q96RI8 345 aa12.81□□□□□ -0.36
C9orf3-204ENST00000424143 RBM7Q9Y580 266 aaKnown RBP12.81□□□□□ -0.36
C9orf3-204ENST00000424143 TMEM30CPA0ZSE6 113 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 MPDU1O75352 247 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 IGHV3-9P01782 118 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 CD55P08174 381 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 FFAR4Q5NUL3 377 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 FIP1L1Q6UN15 594 aaKnown RBP12.8□□□□□ -0.36
C9orf3-204ENST00000424143 OR4F5Q8NH21 305 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 RPUSD4Q96CM3 377 aaKnown RBP12.8□□□□□ -0.36
C9orf3-204ENST00000424143 OR4F4Q96R69 305 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 PCGF1Q9BSM1 259 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms