RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 LRRC75BQ2VPJ9 315 aa5.18□□□□□ -1.58
CHD2-202ENST00000420239 MORN2Q502X0 79 aa5.18□□□□□ -1.58
CHD2-202ENST00000420239 FFAR4Q5NUL3 377 aa5.18□□□□□ -1.58
CHD2-202ENST00000420239 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.18□□□□□ -1.58
CHD2-202ENST00000420239 CFAP161Q6P656 301 aa5.18□□□□□ -1.58
CHD2-202ENST00000420239 SMIM15Q7Z3B0 74 aa5.18□□□□□ -1.58
CHD2-202ENST00000420239 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.18□□□□□ -1.58
CHD2-202ENST00000420239 RPP25LQ8N5L8 163 aaKnown RBP5.18□□□□□ -1.58
CHD2-202ENST00000420239 ZNF114Q8NC26 417 aa5.18□□□□□ -1.58
CHD2-202ENST00000420239 Q8NFD4 153 aa5.18□□□□□ -1.58
CHD2-202ENST00000420239 OR5AU1Q8NGC0 362 aa5.18□□□□□ -1.58
CHD2-202ENST00000420239 OR4F5Q8NH21 305 aa5.18□□□□□ -1.58
CHD2-202ENST00000420239 IFI44Q8TCB0 444 aa5.18□□□□□ -1.58
CHD2-202ENST00000420239 SCGB1C1Q8TD33 95 aa5.18□□□□□ -1.58
CHD2-202ENST00000420239 ZNF501Q96CX3 271 aaPredicted RBP5.18□□□□□ -1.58
CHD2-202ENST00000420239 OR4F4Q96R69 305 aa5.18□□□□□ -1.58
CHD2-202ENST00000420239 SLC25A22Q9H936 323 aa5.18□□□□□ -1.58
CHD2-202ENST00000420239 SEPSECSQ9HD40 501 aaKnown RBP5.18□□□□□ -1.58
CHD2-202ENST00000420239 TUBG2Q9NRH3 451 aa5.18□□□□□ -1.58
CHD2-202ENST00000420239 RNF24Q9Y225 148 aa5.18□□□□□ -1.58
CHD2-202ENST00000420239 NCOA6Q14686 2063 aaPredicted RBP5.18□□□□□ -1.58
CHD2-202ENST00000420239 THADAQ6YHU6 1953 aa5.18□□□□□ -1.58
CHD2-202ENST00000420239 IGKV1-27A0A075B6S5 117 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 IGLV3-32A0A0A0MS00 114 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 IGKV1D-13A0A0B4J2D9 117 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 PIGBOS1A0A0B4J2F0 54 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 A0A1W2PQF6 199 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 TMEM238C9JI98 176 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 DIRC3C9JPN6 131 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 H3BMH7 237 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 H3BML4 177 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 TUSC2O75896 110 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 MMP23AO75900 390 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 IGKV1-13P0DP09 117 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 IAPPP10997 89 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 EGR1P18146 543 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 CBLN1P23435 193 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 EFNA3P52797 238 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 KRTDAPP60985 99 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 HHEXQ03014 270 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 KIR3DS1Q14943 382 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 IZUMO4Q1ZYL8 232 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 RSPO1Q2MKA7 263 aaPredicted RBP5.17□□□□□ -1.58
CHD2-202ENST00000420239 PIGYQ3MUY2 71 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 ACSM6Q6P461 480 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 ZNF818PQ6ZRF7 136 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 C12orf76Q8N812 135 aaPredicted RBP5.17□□□□□ -1.58
CHD2-202ENST00000420239 ZNF738Q8NE65 137 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 OR4C5Q8NGB2 326 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 PSMF1Q92530 271 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 PINX1Q96BK5 328 aaKnown RBP5.17□□□□□ -1.58
CHD2-202ENST00000420239 GPR146Q96CH1 333 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 LOXL4Q96JB6 756 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 BTF3L4Q96K17 158 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 UHRF2Q96PU4 802 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 RNF2Q99496 336 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 WDR61Q9GZS3 305 aaKnown RBP5.17□□□□□ -1.58
CHD2-202ENST00000420239 ZDHHC11Q9H8X9 412 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 SLC39A9Q9NUM3 307 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 ARID1BQ8NFD5 2236 aaPredicted RBP5.17□□□□□ -1.58
CHD2-202ENST00000420239 ARID1AO14497 2285 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 A0A1W2PR80 420 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 EFNA2O43921 213 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 VENTXO95231 258 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 MPLP40238 635 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 PSMB3P49720 205 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 PSG4Q00888 419 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 DLX2Q07687 328 aaPredicted RBP5.17□□□□□ -1.58
CHD2-202ENST00000420239 DAZAP2Q15038 168 aaPredicted RBP5.17□□□□□ -1.58
CHD2-202ENST00000420239 C10orf128Q5T292 105 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 MBNL2Q5VZF2 373 aaKnown RBP5.17□□□□□ -1.58
CHD2-202ENST00000420239 CARD17Q5XLA6 110 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 ERASQ7Z444 233 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 WDR5BQ86VZ2 330 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 GAPTQ8N292 157 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 OR2D3Q8NGH3 330 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 OR10V1Q8NGI7 309 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 OR5D13Q8NGL4 314 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 NEIL1Q96FI4 390 aaPredicted RBP5.17□□□□□ -1.58
CHD2-202ENST00000420239 OXGR1Q96P68 337 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 RAB40CQ96S21 281 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 TXN2Q99757 166 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 VPS25Q9BRG1 176 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 FAM103A1Q9BTL3 118 aaKnown RBP5.17□□□□□ -1.58
CHD2-202ENST00000420239 LRFN3Q9BTN0 628 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 PLA2G2FQ9BZM2 168 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 CSTL1Q9H114 145 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 SLC7A10Q9NS82 523 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 PIGLQ9Y2B2 252 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 TIMM9Q9Y5J7 89 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 SHANK1Q9Y566 2161 aa5.17□□□□□ -1.58
CHD2-202ENST00000420239 IGKV1-12A0A0C4DH73 117 aa5.16□□□□□ -1.58
CHD2-202ENST00000420239 UBE2L5PA0A1B0GUS4 154 aa5.16□□□□□ -1.58
CHD2-202ENST00000420239 PGPEP1LA6NFU8 196 aa5.16□□□□□ -1.58
CHD2-202ENST00000420239 VSTM2BA6NLU5 285 aa5.16□□□□□ -1.58
CHD2-202ENST00000420239 RBFOX2O43251 390 aaKnown RBP eCLIP5.16□□□□□ -1.58
CHD2-202ENST00000420239 PAGE4O60829 102 aa5.16□□□□□ -1.58
CHD2-202ENST00000420239 PDCD6O75340 191 aa5.16□□□□□ -1.58
CHD2-202ENST00000420239 IGKV1D-12P01611 117 aa5.16□□□□□ -1.58
CHD2-202ENST00000420239 FRMD6-AS1P0C7T7 363 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms