RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 FAM131AQ6UXB0 335 aa11.79□□□□□ -0.52
UBXN4-203ENST00000416538 IZUMO2Q6UXV1 221 aa11.79□□□□□ -0.52
UBXN4-203ENST00000416538 GLDNQ6ZMI3 551 aaPredicted RBP11.79□□□□□ -0.52
UBXN4-203ENST00000416538 OR2AK2Q8NG84 335 aa11.79□□□□□ -0.52
UBXN4-203ENST00000416538 SETD6Q8TBK2 473 aa11.79□□□□□ -0.52
UBXN4-203ENST00000416538 ABHD14BQ96IU4 210 aa11.79□□□□□ -0.52
UBXN4-203ENST00000416538 KLK15Q9H2R5 256 aa11.79□□□□□ -0.52
UBXN4-203ENST00000416538 IGKV1-6A0A0C4DH72 117 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 PROP1O75360 226 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 NDUFA3O95167 84 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 HLA-DRB1P01911 266 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 ELANEP08246 267 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 PPIFP30405 207 aaKnown RBP11.78□□□□□ -0.52
UBXN4-203ENST00000416538 SLC6A1P30531 599 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 LUMP51884 338 aaPredicted RBP11.78□□□□□ -0.52
UBXN4-203ENST00000416538 HLA-DRB3P79483 266 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 FHL3Q13643 280 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 KIAA0141Q14154 515 aaPredicted RBP11.78□□□□□ -0.52
UBXN4-203ENST00000416538 C19orf54Q5BKX5 351 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 PLAC9Q5JTB6 97 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 MOB1BQ7L9L4 216 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 PRSS48Q7RTY5 328 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 ARHGAP5-AS1Q96IT6 56 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 MGLLQ99685 303 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 AGMATQ9BSE5 352 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 CCDC90BQ9GZT6 254 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 PLGRKTQ9HBL7 147 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 CHMP1AQ9HD42 196 aaPredicted RBP11.78□□□□□ -0.52
UBXN4-203ENST00000416538 ISYNA1Q9NPH2 558 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 PLEKHJ1Q9NW61 149 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 WSB1Q9Y6I7 421 aa11.78□□□□□ -0.52
UBXN4-203ENST00000416538 NBR2O15453 112 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 RRP9O43818 475 aaKnown RBP11.77□□□□□ -0.53
UBXN4-203ENST00000416538 RGS11O94810 467 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 SCTP09683 121 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 CT45A6P0DMU7 189 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 CT45A5P0DMU8 189 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 CT45A7P0DMV0 189 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 ARSBP15848 533 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 VDAC1P21796 283 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 CALRP27797 417 aaKnown RBP11.77□□□□□ -0.53
UBXN4-203ENST00000416538 CDX1P47902 265 aaPredicted RBP11.77□□□□□ -0.53
UBXN4-203ENST00000416538 VEGFCP49767 419 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 OR10A3P58181 314 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 LINC00205P59089 165 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 TBCEQ15813 527 aaPredicted RBP11.77□□□□□ -0.53
UBXN4-203ENST00000416538 RAB11BQ15907 218 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 C5orf64Q2M2E5 130 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 MOGAT2Q3SYC2 334 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 FAM71F2Q6NXP2 309 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 NPBQ8NG41 125 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 OR51J1Q9H342 316 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 GNB4Q9HAV0 340 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 PARP11Q9NR21 331 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 SLC23A1Q9UHI7 598 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 KCNK7Q9Y2U2 307 aa11.77□□□□□ -0.53
UBXN4-203ENST00000416538 TNCP24821 2201 aa11.76□□□□□ -0.53
UBXN4-203ENST00000416538 SORL1Q92673 2214 aa11.76□□□□□ -0.53
UBXN4-203ENST00000416538 TMEM272A0A1B0GTI8 110 aa11.76□□□□□ -0.53
UBXN4-203ENST00000416538 H0YJW9 148 aa11.76□□□□□ -0.53
UBXN4-203ENST00000416538 SOX15O60248 233 aa11.76□□□□□ -0.53
UBXN4-203ENST00000416538 RAB25P57735 213 aa11.76□□□□□ -0.53
UBXN4-203ENST00000416538 KIR2DS1Q14954 304 aa11.76□□□□□ -0.53
UBXN4-203ENST00000416538 HES5Q5TA89 166 aa11.76□□□□□ -0.53
UBXN4-203ENST00000416538 C4orf3Q8WVX3 66 aa11.76□□□□□ -0.53
UBXN4-203ENST00000416538 FAM3DQ96BQ1 224 aa11.76□□□□□ -0.53
UBXN4-203ENST00000416538 CNBD2Q96M20 576 aa11.76□□□□□ -0.53
UBXN4-203ENST00000416538 PECRQ9BY49 303 aa11.76□□□□□ -0.53
UBXN4-203ENST00000416538 C11orf54Q9H0W9 315 aaPredicted RBP11.76□□□□□ -0.53
UBXN4-203ENST00000416538 Q9N2K0 584 aa11.76□□□□□ -0.53
UBXN4-203ENST00000416538 ABRACLQ9P1F3 81 aa11.76□□□□□ -0.53
UBXN4-203ENST00000416538 HSF4Q9ULV5 492 aa11.76□□□□□ -0.53
UBXN4-203ENST00000416538 A0A0B4J203 849 aa11.75□□□□□ -0.53
UBXN4-203ENST00000416538 ARL6IP5O75915 188 aa11.75□□□□□ -0.53
UBXN4-203ENST00000416538 IGLV1-40P01703 118 aa11.75□□□□□ -0.53
UBXN4-203ENST00000416538 TRAM1Q15629 374 aa11.75□□□□□ -0.53
UBXN4-203ENST00000416538 NR2C2APQ86WQ0 139 aa11.75□□□□□ -0.53
UBXN4-203ENST00000416538 OR8U1Q8NH10 309 aa11.75□□□□□ -0.53
UBXN4-203ENST00000416538 CASTOR1Q8WTX7 329 aa11.75□□□□□ -0.53
UBXN4-203ENST00000416538 C5orf30Q96GV9 206 aa11.75□□□□□ -0.53
UBXN4-203ENST00000416538 URM1Q9BTM9 101 aaKnown RBP11.75□□□□□ -0.53
UBXN4-203ENST00000416538 GON7Q9BXV9 100 aa11.75□□□□□ -0.53
UBXN4-203ENST00000416538 FBXL15Q9H469 300 aa11.75□□□□□ -0.53
UBXN4-203ENST00000416538 C12orf4Q9NQ89 552 aa11.75□□□□□ -0.53
UBXN4-203ENST00000416538 PIPOXQ9P0Z9 390 aa11.75□□□□□ -0.53
UBXN4-203ENST00000416538 STEAP1Q9UHE8 339 aa11.75□□□□□ -0.53
UBXN4-203ENST00000416538 GAB2Q9UQC2 676 aa11.75□□□□□ -0.53
UBXN4-203ENST00000416538 LRRC42Q9Y546 428 aa11.75□□□□□ -0.53
UBXN4-203ENST00000416538 ERICH4A6NGS2 130 aa11.74□□□□□ -0.53
UBXN4-203ENST00000416538 FCN1O00602 326 aa11.74□□□□□ -0.53
UBXN4-203ENST00000416538 ITGB1BP1O14713 200 aa11.74□□□□□ -0.53
UBXN4-203ENST00000416538 RAB29O14966 203 aa11.74□□□□□ -0.53
UBXN4-203ENST00000416538 EGR2P11161 476 aaPredicted RBP11.74□□□□□ -0.53
UBXN4-203ENST00000416538 PSMA1P25786 263 aaKnown RBP11.74□□□□□ -0.53
UBXN4-203ENST00000416538 GNB1P62873 340 aa11.74□□□□□ -0.53
UBXN4-203ENST00000416538 C2orf76Q3KRA6 126 aa11.74□□□□□ -0.53
UBXN4-203ENST00000416538 ZNF367Q7RTV3 350 aa11.74□□□□□ -0.53
UBXN4-203ENST00000416538 ZNF491Q8N8L2 437 aa11.74□□□□□ -0.53
UBXN4-203ENST00000416538 DRAXINQ8NBI3 349 aaPredicted RBP11.74□□□□□ -0.53
UBXN4-203ENST00000416538 OR5AN1Q8NGI8 311 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms