RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 CCSMST1Q4G0I0 132 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 SLC22A6Q4U2R8 563 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 TP53I3Q53FA7 332 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 HIST2H3PS2Q5TEC6 136 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 C9orf135Q5VTT2 229 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 RTL6Q6ICC9 239 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR10K2Q6IF99 312 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 PRSS54Q6PEW0 395 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 OPN5Q6U736 354 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 MRPL52Q86TS9 123 aaKnown RBP2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 LRRC25Q8N386 305 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 ARRDC1Q8N5I2 433 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR51S1Q8NGJ8 323 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR1S2Q8NGQ3 325 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR1B1Q8NGR6 318 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR2A12Q8NGT7 310 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR6N2Q8NGY6 317 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 NT5CQ8TCD5 201 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 RNF138Q8WVD3 245 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 PPP1R1CQ8WVI7 109 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 PCNPQ8WW12 178 aaKnown RBP2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 MS4A6EQ96DS6 147 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 CNRIP1Q96F85 164 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 COX14Q96I36 57 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 SDF2Q99470 211 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 ATP5SQ99766 215 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 OVOL2Q9BRP0 275 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 RPP25Q9BUL9 199 aaKnown RBP2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 PBDC1Q9BVG4 233 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 C1QTNF6Q9BXI9 259 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 TLNRD1Q9H1K6 362 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF665Q9H7R5 613 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 RHOFQ9HBH0 211 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 MARCH5Q9NX47 278 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 CKLFQ9UBR5 152 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 B4GALT7Q9UBV7 327 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 IL36AQ9UHA7 158 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 GNG8Q9UK08 70 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 FZR1Q9UM11 496 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 ANAPC10Q9UM13 185 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 ASF1AQ9Y294 204 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 SLC17A4Q9Y2C5 497 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 AK6Q9Y3D8 172 aaKnown RBP2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 WIPI2Q9Y4P8 454 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 PCYT1BQ9Y5K3 369 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 HEBP2Q9Y5Z4 205 aa2.94□□□□□ -1.94
HMGB3P23-201ENST00000414981 VWA8A3KMH1 1905 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 BPTFQ12830 3046 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 MDC1Q14676 2089 aaKnown RBP2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 NSG1A0A0A6YYJ2 146 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 PIGBOS1A0A0B4J2F0 54 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 KIR2DL5BA0A0G2JN68 375 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 KIR2DL5BA0A0G2JPC4 375 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 IGLON5A6NGN9 336 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 A6NIZ1 184 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR4C45A6NMZ5 311 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 B4DEV8 164 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF732B4DXR9 585 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 SEC14L6B5MCN3 397 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 F5H768 121 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 M0R036 132 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 FADS1O60427 444 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 CA11O75493 328 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 HSBP1O75506 76 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 IGHG3P01860 377 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 HLA-AP01891 365 aaKnown RBP2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 ORM1P02763 201 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 PPBPP02775 128 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 CD3DP04234 171 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 CD2P06729 351 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 SEC11BP0C7V7 166 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 LINC00614P0C842 121 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 HIST1H1BP16401 226 aaKnown RBP2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF14P17017 642 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 PGCP20142 388 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 ALOX5APP20292 161 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 RAB5AP20339 215 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 CD70P32970 193 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 DAP3P51398 398 aaKnown RBP2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 CRYBA4P53673 196 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 CLDN12P56749 244 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 RPS4XP62701 263 aaKnown RBP2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 BTG2P78543 158 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 SRYQ05066 204 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 SRSF6Q13247 344 aaKnown RBP2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 BIKQ13323 160 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR1C1Q15619 314 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 TOMM34Q15785 309 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF141Q15928 474 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 AKIRIN2Q53H80 203 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 TMEM128Q5BJH2 165 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 RNASE10Q5GAN6 216 aaKnown RBP2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 DMRTC1Q5HYR2 192 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 SPIN3Q5JUX0 258 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 VAX1Q5SQQ9 334 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 C1orf100Q5SVJ3 147 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 DCST2Q5T1A1 773 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 CXCL17Q6UXB2 119 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 TMEM184AQ6ZMB5 413 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms